Gene Information

Name : Dd586_2005 (Dd586_2005)
Accession : YP_003333566.1
Strain : Dickeya dadantii Ech586
Genome accession: NC_013592
Putative virulence/resistance : Virulence
Product : DspFAvrF family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2270180 - 2270602 bp
Length : 423 bp
Strand : +
Note : PFAM: DspFAvrF family protein; KEGG: dze:Dd1591_2023 DspFAvrF family protein

DNA sequence :
ATGACATCAGCACAACAACAGGCGGCGCGTTTGCTGCAACATTTCAGTCAGTTTAACCACACCCGACTGACGCTGAATAA
CGGCATCTGTGTTCTGAATGATGCACAGGGGCAAGAGGCGGCGGTCATCGAAGTGCCAGCACAAAGCGACAACCTGCTGC
TGCACTGCCAGATAGTGAACCTGCAAGGGGAAGAGCGACCCGCTATCTACCGCCTGATGTTACTGCTCAATTTCGAAATG
GCGGCGATGCGTGGCTGCTGGCTGGCACTGGATGAGTTCGATAACCTGCGGCTATGCACTCAGCACCCGCTTGATACGCT
GGATGAGCCGGGCTTTACCTCGTTGCTTACTGGTTATATCCGGCAGGTGAGCGACGTTCGAGCCTTTATCACGCAGTCGT
TGGCGGACAGTCAGGCCGCCTGA

Protein sequence :
MTSAQQQAARLLQHFSQFNHTRLTLNNGICVLNDAQGQEAAVIEVPAQSDNLLLHCQIVNLQGEERPAIYRLMLLLNFEM
AAMRGCWLALDEFDNLRLCTQHPLDTLDEPGFTSLLTGYIRQVSDVRAFITQSLADSQAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dspF AAC04851.1 DspF Virulence Hrp PAI Protein 1e-33 50
avrF ABA47300.1 AvrF Not tested S-PAI Protein 2e-22 45
unnamed AAF71500.1 unknown Not tested Hrp PAI Protein 4e-21 42
shcE NP_791203.1 type III chaperone ShcE Virulence Hrp PAI Protein 6e-21 42
avrF AAT96351.1 AvrF Not tested S-PAI Protein 1e-20 41
avrF AAT96271.1 AvrF Not tested S-PAI Protein 2e-20 41
avrF AAT96312.1 AvrF Not tested S-PAI Protein 2e-20 41