Gene Information

Name : Dd586_0643 (Dd586_0643)
Accession : YP_003332241.1
Strain : Dickeya dadantii Ech586
Genome accession: NC_013592
Putative virulence/resistance : Virulence
Product : integral membrane sensor signal transduction histidine kinase
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2205
EC number : -
Position : 716883 - 718355 bp
Length : 1473 bp
Strand : -
Note : PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: cko:CKO_02245 hypothetical protein

DNA sequence :
ATGATCCGCCGTTTAAGCCTCAGCCAGCGTCTGACGCTCGCCTTTACTGCGATTCTTCTGCTGTGTGCTGTTACCGCCTG
CGGCGTGCAGCTTTATAGCAGCAGCCAGTACGGTAATGCGATGGTCCAACGCCTCTCCGGTAGTCTGGCACAGCAAATTG
TCAGCAGTGAATCATTACTGGACGCACAGGGCAGGGTAAACCAACTGTCGTTAAAAACCCTGTTTGACCGCCTAATGACG
CTCAACCCCAGTGTAGAACTCTACCTGGTTTCCCCTGATGGCCAGTTGCTGGCAGATGCCGCCCCACCAGACCATCTCAA
ACGCCAGCGCGTGGCTATCACTCCGCTGCAACGCTTCCTGAGTGGCGCGAGCTTACCTGTGTACGGCGACGATCCACGCA
GCCCAAACGAGCAAAAGGTATTTAGCGCCGCGCCGATAAACCAAAACGGAGAACTGCGGGCCTATCTGTATATCATTTTG
CAAGGCGAGGAGCTCAATGCACTGGCGGACAGCGCCTGGCAGAAAACGCTGTGGCGTACCGTGCTGTGGTCGCTACTGAT
GGTAGCAGGACTCGGCCTGCTGGCAGGCCTGTTGGTCTGGCGGTGGATAACGTGCCCGGTCAGAGAATTAACGGCCGAAG
TGCGTGGACTTGAGCGAGACAGCATCAGCACTATCAAGCAGTTAGCGCAACAGACACCAGAAAACCTGCCAACCAGCGAA
GTGGCGCTACTGCGCAATACCTTCATTGAGCTGGCACGGAAAATCGTCAGCCAGTGGGACCAGCTTTCGGACAGCGACAG
ACAGCGGCGGGAGTTTATTGCCAATATTTCCCACGATCTGCGTACACCGCTCACCTCACTGCTGGGTTATCTGGAGACCT
TGTCAATGAAGGCCGAGACCCTATCGCCGGAAGATAACCGCCAATATCTGGCGATCGCCCTGCGCCAAGGCCACAAGGTT
CGTCATCTGTCACAGCAACTGTTCGAACTGGCAAAACTTGAACATGGTGGAATAAAGCCGCAACTGGAGCGCTTTGCCAT
CGGTGAATTAATCCAGGATGTGGCTCAGAAATTTGATCTGGCTATCGCCACACGTCAGTTGCAGCTAAAAGTGGACATGC
CACCGTCACTACCACAGATATACGCAGACGTATCGATGATTGAACGGGTGGTCACCAACCTGCTGGATAATGCTATTCGG
CATACACCGCAGAGAGGAACTATTCAGCTAAAAGTATGGCAAGAGCATCATCAATTGCAGGTGGAAGTGGCGGATAGCGG
GCCGGGCGTCGAGCCAGTATTGCGCGAGCAGCTGTTTCAGCGGCCATCGGTGCTCAGTCAACAAAGCGTTCGAGAGCACC
GAGGTGGTCTCGGCTTGCTCATTGTGCGGCGCATGCTCGAACTGCACGGAGGGGAGATCCGTCTGATTGACGCCGCAGTC
GGCGCCTGCTTTCGTTTTTTCGTACCGATCTGA

Protein sequence :
MIRRLSLSQRLTLAFTAILLLCAVTACGVQLYSSSQYGNAMVQRLSGSLAQQIVSSESLLDAQGRVNQLSLKTLFDRLMT
LNPSVELYLVSPDGQLLADAAPPDHLKRQRVAITPLQRFLSGASLPVYGDDPRSPNEQKVFSAAPINQNGELRAYLYIIL
QGEELNALADSAWQKTLWRTVLWSLLMVAGLGLLAGLLVWRWITCPVRELTAEVRGLERDSISTIKQLAQQTPENLPTSE
VALLRNTFIELARKIVSQWDQLSDSDRQRREFIANISHDLRTPLTSLLGYLETLSMKAETLSPEDNRQYLAIALRQGHKV
RHLSQQLFELAKLEHGGIKPQLERFAIGELIQDVAQKFDLAIATRQLQLKVDMPPSLPQIYADVSMIERVVTNLLDNAIR
HTPQRGTIQLKVWQEHHQLQVEVADSGPGVEPVLREQLFQRPSVLSQQSVREHRGGLGLLIVRRMLELHGGEIRLIDAAV
GACFRFFVPI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3564 NP_755439.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-162 67

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd586_0643 YP_003332241.1 integral membrane sensor signal transduction histidine kinase VFG1701 Protein 5e-163 67