Gene Information

Name : Sros_4026 (Sros_4026)
Accession : YP_003339677.1
Strain : Streptosporangium roseum DSM 43021
Genome accession: NC_013595
Putative virulence/resistance : Virulence
Product : ATPase AAA-2 domain-containing protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 4480199 - 4482805 bp
Length : 2607 bp
Strand : +
Note : KEGG: sfu:Sfum_0263 ATPase AAA

DNA sequence :
GTGGACGTGAACCAGTTGACACAGAAGTCGCAGGAGGCGCTGCACGACGCCCAGACCAAGGCGCTGCGCTTCGGGCACAC
CGAGATCGACGGGGAGCATCTGCTGCTGGCGCTGCTGGACCAGCCGGACGGCCTGATCCCCCGCCTGCTCACCAAGGCCG
ACGTCGACCTGGACCGGCTCGTCGCCGACCTGGAGGCCGAGCTGAGCCGCAGGCCCAAGGTCAGCGGCCCCGGGGTCGAC
CCCGGCCAGGTCCGGGTGACCCAGCGCCTGTCCCGCCTGCTGGAGACGGCCAAGAGGGAGGCCGACCGGCTCAAGGACGA
CTACGTCTCGGTCGAGCACCTGCTCGTCGCCCTGCTGGAGGAGGGCAGCGAGACCTCCGCCGGCCGGCTGCTCCGCCAGC
AGGGGTTGAGCAGGGACGCCTTCCTCCGGGTGCTCACCGAGATCCGCGGCAACCAGCGGGTCACCTCGGCGATGCCCGAG
GTCGCCTACGAGGCGCTCGCGAAGTACGGCCGCGACCTGGTCGCCGACGCCGCGGCGGGCAAGCTCGACCCGGTCATCGG
GCGCGACAGCGAGATCCGCCGAGTCATCCAGATCCTGTCCCGCAAGTCCAAGAACAACCCGGTCCTGGTCGGCGATCCCG
GGGTCGGCAAGACCGCCATCGTCGAGGGCCTCGCCCAGCGGATCAACAACGGTGACGTGCCCGACGGCCTCAAGGACAAG
ACGGTCTTCAGCCTCGACATGGGCGCCCTCGTGGCCGGTGCGAAGTACCGGGGCGAGTTCGAGGAACGCCTCAAGGCGGT
GCTCACCGAGGTCGTGGCCGCCGAGGGGCGGATCCTGCTCTTCGTCGACGAGCTGCACACGGTCGTGGGCGCGGGCGCGG
CCGAGGGCGCCATGGACGCGGGCAACATGCTCAAGCCCATGCTGGCCCGCGGCGAGCTGCACATGATCGGGGCCACGACC
CTGGAGGAGTACCGCAGGCACATCGAGAAGGACGCCGCCCTGGAGCGCCGCTTCCAGCCCGTGATGGTCGACGAGCCCTC
CGTCGAGGACGCCATCTCGATCCTGCGCGGTCTGCGCGAGCGGCTGGAGGTCTTCCACGGCGTGACGATCCAGGACGGCG
CGCTGGTGGCCGCCGTCGTGCTGAGCCACCGCTACATCTCCGACCGCTTCCTGCCGGACAAGGCCATCGACCTGGTGGAC
GAGGCCTGCGCGATGCTCCGCACCGAGATCGACTCGATGCCCGCCGAGCTCGACGAGCTCACCCGCAGGGTGATGCGGCT
GGAGATCGAGGAGGCCGCGCTGGCCAAGGAGGAGGACCAGGCGAGCAGGGCCCGCCTGGAGGAGCTGCGCAAGGAGCTCG
CCGACCTGCGCGCCGAGGCCGACGCCATGCGGGCGCAGTGGGAGGCCGAGCGGCAGGTGCTGCGCGGCGTCCAGACCCTG
CGCGAGGAGATAGAGCGCGTGCGCACCGAGGCCGAGCGCGCCGAGCGCGACTACGACCTCAACCGCGCCGCCGAGCTGCG
GCACGGCAAGCTGCCCGAGCTCGAACGGCGCCTGCAGGCCGAGGAGGAACGCCTGCTCGCCAAGCAGGGCGCCGGCCGGC
TGCTGCGTGAGGTCGTGACCGAGGAGGAGATCGCGATGATCGTCTCCAGGTGGACGGGCATCCCGGTGAGCCGCCTGCAG
GAGGGGGAGCGGGAGAAGCTCCTGCACCTGGACGAGATCCTGCACGAGCGGGTGATCGGCCAGGACGAGGCGGTGCGGCT
GGTGGCCGACGCCGTCATCAGGGCCCGCTCCGGCATCAAGGACCCGCGCCGTCCGATCGGGTCGTTCATCTTCCTGGGAC
CGACGGGCGTGGGCAAGACCGAGCTGGCCAAGGCGCTCGCGGCGGCGTTGTTCGACACCGAGGACAACATGATCCGCATC
GACATGAGCGAGTACCAGGAGCGTCACACGGTCAGCCGTCTGGTCGGCGCCCCTCCCGGCTACGTCGGGTACGACGAGGG
CGGCCAGCTCACCGAGGCGGTACGGCGCAAGCCGTACTCGGTGGTGCTCTTCGACGAGGTGGAGAAGGCGCATCCCGACG
TCTTCAACACGCTGCTGCAGGTCCTGGACGACGGGCGGCTCACCGACGCGCAGGGCAGGACCGTCGACTTCCGGAACACC
GTCCTGATCATGACGTCCAACATCGGCTCGATCTACCTGCTCGAAGGCGTCACGCCGAGCGGGGAGATCAAGCACGACGT
GCAGGAGCAGGTCATGGCGGAGCTGCGCTCGCACTTCCGTCCCGAGTTCCTCAACCGCGTCGACGACATCGTGATCTTCA
AGCCGCTCACGCCGCAGGAGATCGAGCACATCGTCGAGCTGATGTTCGGGGAGCTGCGGGCGCGGCTCGACGAGCGGGGG
ATAGGGCTGGAGGTGTCCGAAGACGCGCGCAGGTACATCGCCGAGCGGGGATACGACCCGGTGTACGGCGCGCGCCCGCT
GCGCCGGTTCATCGCCAGGGAGGTCGAGACCCGCATCGGCCGTGCGCTGCTCACCGGTGACGTGCACGAGGGCGCCGTGG
TCCGGGTCGGCCTGGCCGAAGGCGAGCTCGTCGTCACCTACGAGTGA

Protein sequence :
MDVNQLTQKSQEALHDAQTKALRFGHTEIDGEHLLLALLDQPDGLIPRLLTKADVDLDRLVADLEAELSRRPKVSGPGVD
PGQVRVTQRLSRLLETAKREADRLKDDYVSVEHLLVALLEEGSETSAGRLLRQQGLSRDAFLRVLTEIRGNQRVTSAMPE
VAYEALAKYGRDLVADAAAGKLDPVIGRDSEIRRVIQILSRKSKNNPVLVGDPGVGKTAIVEGLAQRINNGDVPDGLKDK
TVFSLDMGALVAGAKYRGEFEERLKAVLTEVVAAEGRILLFVDELHTVVGAGAAEGAMDAGNMLKPMLARGELHMIGATT
LEEYRRHIEKDAALERRFQPVMVDEPSVEDAISILRGLRERLEVFHGVTIQDGALVAAVVLSHRYISDRFLPDKAIDLVD
EACAMLRTEIDSMPAELDELTRRVMRLEIEEAALAKEEDQASRARLEELRKELADLRAEADAMRAQWEAERQVLRGVQTL
REEIERVRTEAERAERDYDLNRAAELRHGKLPELERRLQAEEERLLAKQGAGRLLREVVTEEEIAMIVSRWTGIPVSRLQ
EGEREKLLHLDEILHERVIGQDEAVRLVADAVIRARSGIKDPRRPIGSFIFLGPTGVGKTELAKALAAALFDTEDNMIRI
DMSEYQERHTVSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNTLLQVLDDGRLTDAQGRTVDFRNT
VLIMTSNIGSIYLLEGVTPSGEIKHDVQEQVMAELRSHFRPEFLNRVDDIVIFKPLTPQEIEHIVELMFGELRARLDERG
IGLEVSEDARRYIAERGYDPVYGARPLRRFIAREVETRIGRALLTGDVHEGAVVRVGLAEGELVVTYE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 3e-97 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sros_4026 YP_003339677.1 ATPase AAA-2 domain-containing protein VFG2076 Protein 7e-110 43
Sros_4026 YP_003339677.1 ATPase AAA-2 domain-containing protein VFG2084 Protein 2e-99 41