Gene Information

Name : lolD (ROD_11841)
Accession : YP_003364775.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Resistance
Product : lipoprotein-releasing system ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.-
Position : 1277145 - 1277846 bp
Length : 702 bp
Strand : +
Note : -

DNA sequence : 
ATGAATAAGACCCTGTTGCAATGCGACAAACTGTGCAAACGCTATCAGGAAGGTTCCGTGCAAACCGACGTACTGCACGA
TGTCAGCTTCAGCGTTGGCGAAGGTGAAATGATGGCGATTGTCGGCAGCTCCGGCTCCGGCAAAAGTACGCTTTTGCACC
TGCTGGGCGGCCTGGATACCCCCACCTCCGGCGACGTTATTTTTAGCGGCCAGCCGATGAGTAAACTCTCTTCAGCCGCA
AAAGCGGAGCTGCGCAACCAGAAGCTTGGATTTATCTATCAGTTTCACCATCTGCTGCCCGATTTCACCGCGCTGGAAAA
CGTGGCGATGCCGCTGCTGATCGGCAAGCAGAATCACGCTGAGATCACCGGGCGGGCGCGGGAGATGCTGAAGGCGGTCG
GGCTGGAGCATCGTGCGAACCATCGTCCTTCCGAACTTTCCGGTGGCGAGCGCCAGCGCGTGGCGATTGCCCGTGCGTTG
GTCAATAACCCGCGTCTGGTGCTGGCGGACGAACCGACCGGGAACCTTGACGCCCGTAACGCCGACAGCATTTTCCAGCT
GTTGGGCGAGCTGAACCGCGCGCAGGGCACCGCGTTTCTGGTGGTAACGCACGATTTGCAACTGGCGAAGCGCATGAGCC
GCCAGCTGGAGATGCGTGACGGACGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAA

Protein sequence : 
MNKTLLQCDKLCKRYQEGSVQTDVLHDVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFSGQPMSKLSSAA
KAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKQNHAEITGRAREMLKAVGLEHRANHRPSELSGGERQRVAIARAL
VNNPRLVLADEPTGNLDARNADSIFQLLGELNRAQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELSLMGAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_003364775.1 lipoprotein-releasing system ATP-binding protein NC_008702.1.4606598. Protein 3e-37 48
lolD YP_003364775.1 lipoprotein-releasing system ATP-binding protein NC_012469.1.7686878. Protein 4e-41 44
lolD YP_003364775.1 lipoprotein-releasing system ATP-binding protein CP001581.1.gene798.p Protein 1e-36 41