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Name : shiA (ROD_20931) Accession : YP_003365645.1 Strain : Citrobacter rodentium ICC168 Genome accession: NC_013716 Putative virulence/resistance : Unknown Product : shikimate transporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2223 EC number : - Position : 2195467 - 2196783 bp Length : 1317 bp Strand : + Note : - DNA sequence : ATGGACTCCACTCTTATCTCCCCCTCTGCGCAGGAGGCAACGCCTTCACTTCATCGTGCCCGCCGCGCCGCGCTGGGCAG CTTTGCTGGCGCGGTTGTCGACTGGTACGACTTTTTACTTTACGGCATTACCGCTGCGCTGGTGTTTAACAGCGAATTTT TCCCGCAGATCAGTCCGGCAATGGGCACGCTTGCCGCATTTGCCACCTTTGGCGTCGGCTTCCTGTTCCGTCCGCTGGGT GGGGTGATTTTTGGCCACTATGGCGATCGCCTGGGACGCAAGCGGATGCTGATGCTTACCGTCTGGATGATGGGTATCGC CACCGCGCTGATCGGTATTTTGCCCTCCTTCGCCACCATCGGCTGGTGGGCGCCGGTCATACTGGTTTTATTGCGGGCGA TTCAGGGCTTTGCCGTCGGCGGCGAATGGGGCGGCGCAGCCTTATTGTCCGTCGAAAGCGCGCCAGAAAATAAAAAAGCG TTTTACAGCAGCGGCGTGCAGGTCGGTTACGGCGTCGGCCTGTTGCTCTCCACCGGCCTGGTTTCGGCAATCAGCTATCT CACCACCGATGAGCAGTTCCTCAGCTGGGGCTGGCGACTGCCGTTCCTGTTCAGCATCGTACTGGTGCTGGGCGCGCTAT GGATAAGAAACGGCATGGAGGAGTCTGCGGAGTTTGAGCAGCAGAAGCAAAAGGCGCCGGAAGAGAAAAAACGCCTGCCG GTGCTCGAAGCGCTGGCGCGTCACCCTGGCGCATTTTTGAAAATTATCGCCCTGCGCCTGTGCGAACTACTCACCATGTA TATCGTCACCGCCTTCGCGCTGAACTACTCAACGCAAAACCTCGGTCTGCCACGTGAGCTTTTTCTCAACATCGGCCTGT TAGTCGGCGGGCTTAGCTGTCTGACCATCCCCTGCTTCGCCTGGCTGGCGGACCGTTTTGGACGGCGGCGCGTCTATATT ACCGGAGCGCTGATTGGCTCGCTCAGCGCGTTTCCGTTCTTTATGGCGCTTGAAGCGCAATCCCTGTTCTGGATTGTGTT CTTTTCGATCATGCTCGCTAATATCGCCCATGACATGGTGGTCTGCGTACAGCAGCCGATGTTCACCAGCATGTTTGGCG CGGGATACCGCTACAGCGGCGCTGGCGTCGGCTATCAGGTGGCAAGCGTCGTCGGCGGCGGCTTTACCCCTTTTATCGCT GCCGCTCTGGTGACCTTTTTCGGCGGCAGCTGGCACAGCGTCGCCATCTATCTGTTGGCAGGCTGCCTGATTTCGGCCCT CACCGCACTGTTAATGAAAGACAAACACCACGCCTGA Protein sequence : MDSTLISPSAQEATPSLHRARRAALGSFAGAVVDWYDFLLYGITAALVFNSEFFPQISPAMGTLAAFATFGVGFLFRPLG GVIFGHYGDRLGRKRMLMLTVWMMGIATALIGILPSFATIGWWAPVILVLLRAIQGFAVGGEWGGAALLSVESAPENKKA FYSSGVQVGYGVGLLLSTGLVSAISYLTTDEQFLSWGWRLPFLFSIVLVLGALWIRNGMEESAEFEQQKQKAPEEKKRLP VLEALARHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYI TGALIGSLSAFPFFMALEAQSLFWIVFFSIMLANIAHDMVVCVQQPMFTSMFGAGYRYSGAGVGYQVASVVGGGFTPFIA AALVTFFGGSWHSVAIYLLAGCLISALTALLMKDKHHA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1067 | YP_853084.1 | shikimate transporter | Not tested | PAI IV APEC-O1 | Protein | 4e-170 | 90 |
