Gene Information

Name : ROD_20951 (ROD_20951)
Accession : YP_003365647.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0534
EC number : -
Position : 2198585 - 2200069 bp
Length : 1485 bp
Strand : -
Note : -

DNA sequence :
GTGGTTTCAACTTTCTTTCTAAGGTCCATTTTGAACGTCTCCACTGCTTTACGCCAGGCTGTTGCCCGCACCCCCTGGTA
CGCCAAACGCAAGAGTTATAAGGTCCTTTTCTGGCGAGAAATTACTCCGCTTGCCGTACCTATTTTTCTGGAGAACACCT
GCGTTCTGTTGATGGGGGTGCTCAGTACCTTTCTCGTCAGCTGGCTGGGTAAAGAAGCGATGGCGGGCGTGGGGCTGGCC
GATAGCTTTAATATGGTCATCATGGCTTTTTTCGCGGCTATCGATCTTGGTACGACGGTAGTGGTGGCGTTCAGCCTGGG
TAAGCGCGATCGCAGACGCGCCCGCGCCGCTGCCAGACAATCGCTGGTGATCATGACGCTTTTCGCCGCCATTCTGGCTG
CGGTTATCCACTACTTTGGCGCGCAAATTATTGACGTTGTCGCCGGTGAAGCGACGGCTGAAGTAAAGGCGCTGGCGCTT
ACCTATCTGGAATTAACGGTGATTAGCTATCCCGCCGCCGCTATTGCGTTGATTGGCAGCGGCGCGCTGCGCGGCGCAGG
GAATACAAAAATTCCGCTGCTGATCAATGGCGGGATGAATATCCTCAACATCATCATCAGCAGCATCCTGATCTACGGCC
TTTTTTCGTGGCAAGGGCTGGGTTTTGTCGGCGCAGGGTTAGGGCTGACCATTTCGCGCTATATCGGCGCGGTGGCGATA
ATCTGGGTGCTAATGATTGGCTTTAACCCGGCGCTGCGTATTCCGCTCAAGAGTTATTTTAAACCGCTTAATTTCGCCAT
TATCTGGGAGGTGATGGGGATAGGCATTCCCGCCAGCATTGAGTCGGTTCTTTTCAACGGCGGTAAGCTGTTAACGCAGA
TGTTTGTCGCCGGGATGGGCACCAGCGTGATTGCCGGCAACTTTATTGCCTTTTCTATTGCCGCGCTGATTAACCTGCCG
GGGAACGCGCTGGGGTCGGCCTCGACCATCATCACCGGAAGACGGTTAGGTAACGGGCAGATTGCGCAGGCGGAAATCCA
GTTACGTCACGTGTTCTGGCTTTCGACCATTGGACTGACGGCGATCGCATGGCTAAGCGCTCCCTTTGCCGGGCTAATGG
CCTCGTTTTACACTCACGATCGGGAAGTTAAAGACGTTGTGGTGATCCTTATCTGGCTTAACGCCGCGTTTATGCCGATC
TGGGCGGCTTCATGGGTTTTACCTTCCGGATTCAAAGGTGCGCGTGATGCGCGTTTTGCGATGTGGGTATCCATGCTGGG
TATGTGGGGCTGTCGCGTGGTGGCCGGTTATACGTTGGGGATTGTGCTTGGCTGGGGCGTCGTCGGGGTCTGGCTCGGAA
TGTTTTTCGACTGGGCGGTGCGTGCGGCGCTGTTTTACTGGCGTATGGTCAGCGGTCGCTGGTTATGGAAATATCCGCGT
CCGGAGCATAAAAAGAGCGCCAAAACGCCCGTTGCGTCTGAATAA

Protein sequence :
MVSTFFLRSILNVSTALRQAVARTPWYAKRKSYKVLFWREITPLAVPIFLENTCVLLMGVLSTFLVSWLGKEAMAGVGLA
DSFNMVIMAFFAAIDLGTTVVVAFSLGKRDRRRARAAARQSLVIMTLFAAILAAVIHYFGAQIIDVVAGEATAEVKALAL
TYLELTVISYPAAAIALIGSGALRGAGNTKIPLLINGGMNILNIIISSILIYGLFSWQGLGFVGAGLGLTISRYIGAVAI
IWVLMIGFNPALRIPLKSYFKPLNFAIIWEVMGIGIPASIESVLFNGGKLLTQMFVAGMGTSVIAGNFIAFSIAALINLP
GNALGSASTIITGRRLGNGQIAQAEIQLRHVFWLSTIGLTAIAWLSAPFAGLMASFYTHDREVKDVVVILIWLNAAFMPI
WAASWVLPSGFKGARDARFAMWVSMLGMWGCRVVAGYTLGIVLGWGVVGVWLGMFFDWAVRAALFYWRMVSGRWLWKYPR
PEHKKSAKTPVASE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yeeO YP_853088.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 2e-155 87

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ROD_20951 YP_003365647.1 hypothetical protein BAC0146 Protein 1e-157 88