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Name : cobT (ROD_21011) Accession : YP_003365652.1 Strain : Citrobacter rodentium ICC168 Genome accession: NC_013716 Putative virulence/resistance : Unknown Product : nicotinate-nucleotide dimethylbenzimidazole phosphoribosyltransferase Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG2038 EC number : 2.4.2.21 Position : 2205305 - 2206369 bp Length : 1065 bp Strand : - Note : - DNA sequence : ATGCAGACGTTAACCTCTCTACTTAGCGAAATTCCGCCACCGGACAGCGGCGCAATGGCACGAGCCCGACAGCATATTGA TGGTCTGCTTAAGCCCCCCGGTAGCCTGGGACGCCTGGAAGCGCTTGCCGTACAGCTGGCAGGTATGCCCGGACTTAACG GCGTGCCGCAGGTTGCGGAAAAAGCCGTGCTGGTGATGTGCGCCGATCACGGCGTCTGGGATGAAGGGGTGGCGATTTCG CCGAAGGCGGTGACTGCTATTCAGGCGGCTAATATGACCCGCGGGACGACGGGGGTCTGCGTGCTGGCGGCGCAGGCAGG CGCGAAGGTGCATGTTATTGATGTGGGAATAGATGCCGATCCGATCCCCGGCGTGGTGAATATGCGCGTGGCGCGCGGCT GCGGCAATATCGCCGTCGGCCCGGCGATGAGCCGTACTCAGGCGGAAGCGTTGCTGCTGGAGGTGATGCGCTATACCCGC CAACTGGCGGACAGCGGCGTTACCTTGTTTGGCGTCGGCGAGCTGGGAATGGCGAACACCACCCCCGCGTCGGCGATGCT CAGCGTGCTGACCGGCAGTGACGCCGAAGCCGTGGTGGGAATTGGCGCGAACCTGCCGCCTGCGCGTATTGGTAATAAGG TCGAGGTGGTTCGTCGTGCGATTGCCGTCAACCAGCCTGACCCGGGTGACGGCGTCGACGTGCTGGCGAAGGTCGGCGGA TTTGATCTGGCAGGTATGGCGGGGGTAATGCTGGGCGCGGCCTCCTGCGGCTTACCGGTGCTGCTGGACGGTTTCCTCTC CTGTTCCGCCGCGCTGGCGGCCTGCCGGATAGCGCCAGCGGTTAAACCTTACCTCATCCCCTCCCATTATTCAGCGGAGA AGGGGGCGCGGATTGCGCTGGAGCATCTGGAACTGACGCCTTATCTCAATATGGAAATGCGCCTGGGCGAGGGCAGCGGC GCGGCGCTGGCGATGCCGATTGTCGAGGCCGCCTGCGCCATGTACCACAATATGGGACAGCTGACCGACAGCAATATTGT TTTGCCTGACGGGAAATCGTCTTAA Protein sequence : MQTLTSLLSEIPPPDSGAMARARQHIDGLLKPPGSLGRLEALAVQLAGMPGLNGVPQVAEKAVLVMCADHGVWDEGVAIS PKAVTAIQAANMTRGTTGVCVLAAQAGAKVHVIDVGIDADPIPGVVNMRVARGCGNIAVGPAMSRTQAEALLLEVMRYTR QLADSGVTLFGVGELGMANTTPASAMLSVLTGSDAEAVVGIGANLPPARIGNKVEVVRRAIAVNQPDPGDGVDVLAKVGG FDLAGMAGVMLGAASCGLPVLLDGFLSCSAALAACRIAPAVKPYLIPSHYSAEKGARIALEHLELTPYLNMEMRLGEGSG AALAMPIVEAACAMYHNMGQLTDSNIVLPDGKSS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cobT | YP_853092.1 | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | Not tested | PAI IV APEC-O1 | Protein | 6e-129 | 78 |
