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Name : ccmF (ROD_23271) Accession : YP_003365872.1 Strain : Citrobacter rodentium ICC168 Genome accession: NC_013716 Putative virulence/resistance : Unknown Product : cytochrome C-type biogenesis protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 2444157 - 2446100 bp Length : 1944 bp Strand : - Note : - DNA sequence : ATGATGCCTGAATTTGGCAACGCGCTGCTGTGTCTGGCGCTGGGCGTCGCCGTGCTCCTCTCCGTCCTGCCGCTATGGGG CGTAGGGCGCGGCGACGTGCGGATGATGGCTTCGGCAAGACCGTTTGCCTGGCTGCTGTTCATCCTGGTGATGGGCGCCT TTATGGTGCTGATTAACGCTTTTGTGGTGAATGATTTCACCGTGCTCTACGTGGCCAGCAACTCCAACACCGAACTGCCG GTCTGGTATCGCGTGGCCGCCACCTGGGGCGCGCACGAAGGTTCGCTGCTGCTGTGGGTGCTGCTGATGAGCGGCTGGAC GTTCGCCGTGGCGCTGTTTTCTCAGCGGATGCCGCTGGATATCGTCGCCCGGGTGCTGGCGGTGATGGGGATGGTCAGCG TCGGCTTCCTGCTGTTCATTCTCTTCACCTCGAATCCGTTCGCCCGCACGCTGCCGGATTACCCAATAGAGGGGCGCGAT CTCAATCCGCTGTTGCAGGATCCGGGGCTTATCTTCCATCCGCCGCTGCTGTATATGGGCTACGTCGGTTTTTCGGTCGC CTTTGCTTTTGCTATCGCCGCGCTGATGAGCGGTCGTCTGGACAGCACCTTCGCCCGCTTCTCGCGCCCGTGGACGCTGG CGGCGTGGGTGTTTCTGACGCTGGGGATCGTGCTTGGTTCTGCCTGGGCTTATTACGAGCTTGGCTGGGGCGGCTGGTGG TTCTGGGACCCGGTAGAGAACGCTTCGTTCATGCCGTGGCTGGTGGGCACCGCGTTGATGCACTCGCTGGCCGTTACCGA ACAGCGCGCCAGCTTTAAGGCGTGGACGCTGCTGCTCTCCATCTGCGCCTTCTCGCTCTGTCTGCTCGGCACTTTCCTGG TGCGCTCGGGAGTGCTGGTTTCGGTGCACGCGTTTGCTTCCGATCCGTCGCGCGGGATGTTTATCCTGGCCTTTATGGTG CTGGTGATCGGCGGCTCGCTGCTGCTGTTCGCTACCCGGGGGCATAAGGTTCGTTCACGGGTCAATAACGCGCTGTGGTC GCGTGAGTCGCTGCTGCTGGGTAACAACGTGCTGCTGATTGCCGCCATGCTGGTGGTGCTGTTAGGAACGCTGCTGCCGC TGGTGCACAAGCAGCTGGGGCTGGGCAGTATTTCCATCGGCGAGCCGTTCTTTAATACCATGTTTACCTGGCTGATGGCG CCGTTTGCTCTGCTGCTGGGCATCGGCCCGCTGGTGCGCTGGGGGCGGGATCGTCCGCGGAAGCTGCGGCGTCTGCTGAT GGTTGCGCTCGTCAGTACGCTGGCGCTCTCTCTTCTGCTGCCGTGGCTGTTTGAAAACAAAATTGTCGCAATGACGGTAG TCGGACTGGCGATGGCCTGCTGGGTCTTTGTGCTGGCGATCGCTGAGGTCGTCCGACGCGTCTCCCTCGGCGGTAAAATG ACGTTGAGCTACTGGGGGATGGTGCTCGGTCACGTTGGCCTGGCGGTGACCGTCGTCGGCATTGCCTTTAGCCAGAACTA TAGCGTTGAGCGGGATGTGCGGATGAAGGTGGGCGACAGCGTCGATATCCATCAGTACCGTTTTACCTTCCGCGATGTGA AAGACATTACCGGTCCGAACTACCGCGGCGGGGTGGCGATGATCGACGTCACGCGGGACGGCAAGGCGGAAGCGACGCTG CACGCGGAAAAACGCTTTTACAACAGTACCCGCTCGATGATGACGGAAGCGGCGATTGACGGCGGCATCGCCCGCGATCT GTATGCGGCGCTGGGTGAGGAGCTGGACAACGGCGCGTGGGCGGTACGCCTGTATTACAAACCGTTTATTCGCTGGATAT GGGCGGGTGGGCTGCTGATGGCGCTGGGCGGGCTGTTCTGCCTGTTTGATCCGCGCTATCGCAAGCGCGCACGACCGCAG AACACCGCGCCGGAGGCTGTATGA Protein sequence : MMPEFGNALLCLALGVAVLLSVLPLWGVGRGDVRMMASARPFAWLLFILVMGAFMVLINAFVVNDFTVLYVASNSNTELP VWYRVAATWGAHEGSLLLWVLLMSGWTFAVALFSQRMPLDIVARVLAVMGMVSVGFLLFILFTSNPFARTLPDYPIEGRD LNPLLQDPGLIFHPPLLYMGYVGFSVAFAFAIAALMSGRLDSTFARFSRPWTLAAWVFLTLGIVLGSAWAYYELGWGGWW FWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLSICAFSLCLLGTFLVRSGVLVSVHAFASDPSRGMFILAFMV LVIGGSLLLFATRGHKVRSRVNNALWSRESLLLGNNVLLIAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMA PFALLLGIGPLVRWGRDRPRKLRRLLMVALVSTLALSLLLPWLFENKIVAMTVVGLAMACWVFVLAIAEVVRRVSLGGKM TLSYWGMVLGHVGLAVTVVGIAFSQNYSVERDVRMKVGDSVDIHQYRFTFRDVKDITGPNYRGGVAMIDVTRDGKAEATL HAEKRFYNSTRSMMTEAAIDGGIARDLYAALGEELDNGAWAVRLYYKPFIRWIWAGGLLMALGGLFCLFDPRYRKRARPQ NTAPEAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 0.0 | 84 |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 2e-127 | 54 |
