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Name : cts1G (ROD_27671) Accession : YP_003366298.1 Strain : Citrobacter rodentium ICC168 Genome accession: NC_013716 Putative virulence/resistance : Unknown Product : VgrG family T6SS protein Cts1G Function : - COG functional category : S : Function unknown COG ID : COG3501 EC number : - Position : 2917403 - 2919745 bp Length : 2343 bp Strand : - Note : VgrG component of T6SS. Similar to Rhs family proteins DNA sequence : ATGTCACGTACTATTACATTAAGCAGTCCGGCGATGCCGTTATTGCTGGGCGATACCGCTCTGGTTATCTCTAAGCTGGA TGGCGAAGAGGCGCTGTCGTCCCTGTACTCCTATGTGATTACGGCTAAAACCCCGGCTAACCCTTTAATTCCCTGGCAGG CCGCATCGAATGTCGATTTAAAAGCATTAATCGGCAAAGAAATGACCGTCACCATTGAACTGGATGGTAACGGATTGGGG GATATTTTTGCCATTGGTAAAGATACCCGGGAAATATCAGGAATTGTGCAACGTGCGCGTTATATCGGACGCGATAGTAA TCAGGCGCTCTATGAAATTGTGATTCGCCCATGGCTGCATCTGGCAGAACTGACTACGGATTTTAAAATATTCCAGAAAA AAACCGTGGTGGATATTATTGATGAGGTGTTAGGCGATTACAATTTCCCGTTAGAAAAAAGGCTGGCGGGAAGCTATCCG CTGCTGGATTTCCAGGTTCAGTATGGTGAAAGCGACTTTAATTTTATTGAACGGTTAATGGAAGAGTGGGGGATTTATTG GTTCTTTGAACATGCCGAACAGTACCACAAACTGATTCTGGTGGATAACGTCGGGGCGCATAAACGTTTCCCGAGTGAAG CTTATCATGTGGTTCAGTACGCAGCCGATCGTCCGAAGATGGACCAGGAATATATCAGCCAGTTTCATTTTCAGGAAACC ATTACCTCCGGGAAATGGGTCACCAATGATTATGATTTTACGAAATCACGTGCCGATATTATGGCGCTGGACAGCAAGCC GCGTAAAACCAGTTTTAACGAGATGGAGATCTTCCACTGGCCAGGCGATTACGAGCAGCCCAATATCGGTGAGCAGCTGG CGCGGGTACGAATGGAAGAACGCGGGGCGCTGGGGTCACGCTGCGAAGGTTCCGGTGAACTGCGCGGAATTGCCTGCGGG TGCGATTTTGAACTGGTGAATTACCCCGTCGAGAAAGCGAACCGCGAATACATGATTTTGCGAAGCCATCTGGTGGTGGA AGAGATTAATCAGGTGACCGACGTGGACGAATTCCGTTATCACTGCGATTTTACCGTTCAGCCAACCACCAAGATTTATC GCCACCCGATGACGGTGCCCAGGCCGAAAACCAGCGGACCGCAAACGGCTATCGTTGTGGGTCCTGATGGCGAAGAGATC TGGACCGACGAATATGGCCGCGTAAAGGTACGTTTTTTGTGGGATCGCTACGGTAAAAACCGGGAGTCCGACTCCTGCTG GCTACGTGTGAGCCAGGCCTGGGCCGGAAATAACTTTGGCGGGATCTATATTCCCCGTATCGGCCATGAAGTGATTGTCG ACTTTATTAACGGCGATCCTGACCGACCGCTGATTATCGGCAGCCTGTACAACAACGTAACGATGCCGCCGTGGGATCTG CCGGTGAACGCTACGCAGAGCGGGCTGGTTAGCCGCACCGTTGGCGGTGGGCGCAGCAACTTTAACGGCATTCGCTTTGA AGATAAGCCCGGGCTTGAGCAGTACTGGGAACAGGCCGAGCGCAATATGACTCGTTTAACCAAGCAAAACGAGGAGCAGA CCATCGGCATGAATTCCAACGTGAATGTCGGTCTGTCACGAAATCTGTTCGTTGGCGCGAACTATATGTCGGATGTGGTC GGCAACAGTAGCGCCATCATCGGCGGCGCGCTGGCCATTCAGGTGGGCGGAGGCCAGACCGATAACGTTGCGCTGGCAAA GGGAATTAACGTCGGCGGCGCGTTTATGACGACCGTTGGCGGCTATCACTCGCTGGCTGTCGGCGGCGCAAGCACCACCG TTGCGGGAGGGGCGATGACGCTCACTGCAGGCGGTGAACTGGTGCTCTCGGCGAAGAAGATCAAAATCGTCGGTTCCGAA CAGGTCATTATTCAGGGCGGCACGGTCGAGCTTAACCCTGGCGACTGCAGCGATAACTGCGGCGGCGGCGGTGGGGGCGG TGGCGCAATGATTGGCCTGCCGGGCCTGCCTGCGATTCCATCGCTGTTTGGCGTTGTGCTTCCGTTACCGCTGCTTCCGA CGCCAACGCCTGCGCCTACGACATCAACGGACACGCCAACGGAATCCCCGACGGAGACGCCAACAGAAACCCCAACGGAG ACGCCAACGGAAACCCCGACGGAGACGCCAACGGAAACCCCGACGGAGACGCCAACGGAAACCCCGACGGAGACGCCAAC GGAAACTCCGACGGAGACGCCAACGGAAACCCCGACGGAAACCCCAACAGAGACACCAACGGAAACCCCGACGGAGACAG GCAACGCAATTCCTGAACCTTAA Protein sequence : MSRTITLSSPAMPLLLGDTALVISKLDGEEALSSLYSYVITAKTPANPLIPWQAASNVDLKALIGKEMTVTIELDGNGLG DIFAIGKDTREISGIVQRARYIGRDSNQALYEIVIRPWLHLAELTTDFKIFQKKTVVDIIDEVLGDYNFPLEKRLAGSYP LLDFQVQYGESDFNFIERLMEEWGIYWFFEHAEQYHKLILVDNVGAHKRFPSEAYHVVQYAADRPKMDQEYISQFHFQET ITSGKWVTNDYDFTKSRADIMALDSKPRKTSFNEMEIFHWPGDYEQPNIGEQLARVRMEERGALGSRCEGSGELRGIACG CDFELVNYPVEKANREYMILRSHLVVEEINQVTDVDEFRYHCDFTVQPTTKIYRHPMTVPRPKTSGPQTAIVVGPDGEEI WTDEYGRVKVRFLWDRYGKNRESDSCWLRVSQAWAGNNFGGIYIPRIGHEVIVDFINGDPDRPLIIGSLYNNVTMPPWDL PVNATQSGLVSRTVGGGRSNFNGIRFEDKPGLEQYWEQAERNMTRLTKQNEEQTIGMNSNVNVGLSRNLFVGANYMSDVV GNSSAIIGGALAIQVGGGQTDNVALAKGINVGGAFMTTVGGYHSLAVGGASTTVAGGAMTLTAGGELVLSAKKIKIVGSE QVIIQGGTVELNPGDCSDNCGGGGGGGGAMIGLPGLPAIPSLFGVVLPLPLLPTPTPAPTTSTDTPTESPTETPTETPTE TPTETPTETPTETPTETPTETPTETPTETPTETPTETPTETPTETPTETPTETGNAIPEP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0319 | NP_454896.1 | Rhs-family protein | Not tested | SPI-6 | Protein | 6e-123 | 41 |
