|
Name : espF (ROD_29701) Accession : YP_003366484.1 Strain : Citrobacter rodentium ICC168 Genome accession: NC_013716 Putative virulence/resistance : Virulence Product : T3SS effector protein EspF Function : - COG functional category : - COG ID : - EC number : - Position : 3146881 - 3147786 bp Length : 906 bp Strand : - Note : - DNA sequence : ATGCTTAATGGAATTGGTCAGGCCGTTTCTACACTAGGACGGCAGCTTGCAAATGTGGCAAGTCGGGTGGGCTCTGTGGG AGGTGCGAGCTTTTCAGTTTCCCCTCAGGCAGTGCGTCTGACCACGATTAGAATTCAATCTCCTTTTTCTCCGGCTGTGT CGCATATCAATGCAAGAACGAATTTTAATGTGAGTGGAGTTACAACGTCATTAACTCCCTCTCGCCCTGCACCATCACCG CCGACAAGTGGACAGTCCACCGGGCGATCCCAGTCTTTACCCCCTATTGCACAGGCATTAAAAGACCATTTGGCAGCCTT TGAAGCGTCTAAAAGTTTAGAGGCCTCAAGCCTTAAGCCAGCTCGTCCGGCACCACAATCACCGACAAATGGACAGTCCA CCGGGCGATCCCAGTCTTTACCCCCCATTGCACAGGCATTAAAAGACCATTTGGCAGCTTTTGAAGCGTCTAAAAGTTTA GAGGCCTCAAACCTTAAGCCAGCTCGTCCGGCACCACAACCACCGACAAATGGACAGTCCACCGGGCGAGCCCAGTCTTT ACCCCCCATTGCACAGGCATTAAAAGACCATTTGGCAGCTTTTGAAGCGTCTAAAAGTTTAGAGGCCTCAAGCCTTAAGC CAGCTCGTCCGGCACCACAACCACCGACAAGTGGACAGTCCACCGGGCGATCTCAGTCTTTACCCCCTATTGCACAGGCA TTAAAAGACCATTTGGCAGCCTTTGAAGCGTCTAAAAGTTTAGAGGCCTCAAGCCTTAAGCCAGCTCGTCCGGCACCACA ACCACCGACAAGTGGACAGTCCACCGGACGAGCCCAGTCTTTACCTCCCATTGCACAGGCATTAAAAGATCATTTGGCAG CCTATCAGCAATTTAAAAATGGATAA Protein sequence : MLNGIGQAVSTLGRQLANVASRVGSVGGASFSVSPQAVRLTTIRIQSPFSPAVSHINARTNFNVSGVTTSLTPSRPAPSP PTSGQSTGRSQSLPPIAQALKDHLAAFEASKSLEASSLKPARPAPQSPTNGQSTGRSQSLPPIAQALKDHLAAFEASKSL EASNLKPARPAPQPPTNGQSTGRAQSLPPIAQALKDHLAAFEASKSLEASSLKPARPAPQPPTSGQSTGRSQSLPPIAQA LKDHLAAFEASKSLEASSLKPARPAPQPPTSGQSTGRAQSLPPIAQALKDHLAAYQQFKNG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL06387.1 | EspF | Virulence | LEE | Protein | 3e-114 | 100 |
| espF | CAI43856.1 | EspF protein | Virulence | LEE | Protein | 2e-66 | 75 |
| espF | YP_003223457.1 | T3SS effector EspF | Virulence | LEE | Protein | 2e-66 | 75 |
| espF | NP_290250.1 | hypothetical protein | Virulence | LEE | Protein | 2e-56 | 66 |
| ECs4550 | NP_312577.1 | protein EspF | Virulence | LEE | Protein | 2e-56 | 66 |
| unnamed | AAC31495.1 | L0016 | Not tested | LEE | Protein | 2e-56 | 66 |
| unnamed | ACU09440.1 | LEE associated secreted protein EspF | Virulence | LEE | Protein | 2e-56 | 66 |
| espF | YP_003236070.1 | T3SS secreted effector EspF | Virulence | LEE | Protein | 9e-53 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| espF | YP_003366484.1 | T3SS effector protein EspF | VFG0794 | Protein | 9e-57 | 66 |
