Gene Information

Name : fecA (ROD_34371)
Accession : YP_003366898.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Virulence
Product : iron(III) dicitrate TonB-dependent receptor
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4772
EC number : -
Position : 3625245 - 3627560 bp
Length : 2316 bp
Strand : -
Note : -

DNA sequence :
ATGACCGTTCATAACACAGTACCGCTGGCTAAAGCGATGCGTTCCGGCCTGCTGCCGCTCATTGGGCTACTTTCACTGCC
AGCCTTCGCCGCCCGGTTTGACATTGCCGCCGGGGATTTAGATAAAGCGCTAAATCAGTACGCCGCCGAAAGCGGCATCA
TGTTATCCGTTGACGCCTCGCTCACCCGGGGAAAGCGCAGTCACGGGCTGCACGGCGATTTCGCGCATGAGGAGGGTCTG
TATACCCTGCTCCAGGGCAGCGGCCTGCAGGTTAAATCGTTGGACAATAACGCCTGGACGCTGGAACCCGCGGCGGCGGG
CGCGGAAGATTCCCTTACCGTGGTCGGCGACTGGCTGGGCGAAGCGAGAGAAAACGACGTGTTCGAACACGCGGGAGCGC
GAGATGTCATCCGCCATGACGAAGCGAACAAAACCGGCGCAACCACCGTGCGTGAAGCGCTGAACCGCATCCCCGGCGTC
AATGCCCCGGAAAATAACGGCACCGGCAGCCACGATCTGGCGCTGAACTTTGGGATTCGCGGCCTGAACCCGCGTCTGGC
AAGTCGCTCGACGGTATTAATGGACGGTATCCCGCTGCCCTTTGCCCCCTACGGCCAGCCGCAGTTGTCCCTGGCCCCCG
TATCGCCGGGCAATATGGACGCGATTGACGTGGTACGCGGCGGCGGCGCGGTGCGTTACGGGCCGCAGAGCGTCGGCGGC
GTCGTAAACTTTGTCACCCACGCCATTCCGCAGGATTTTGGCATTAAAGCCAGCATGGAAGGGCTGCAAAGCCCTCAGTC
ATCGCAGAACAACCCGAAAGAGACGCACAGCCTGCTGGTGGGCGGTACGGCGGAAAATGGCTTTGGCGCGGCGCTACTCT
ATTCCGGCACGCGCGGCAGCGACTGGCGCGAACACAGCGATACCCGCATTGATGACGTGCTGCTGAAAAGCAAATACGCG
CCGAACGAGGCGCATACCTTTAACAGCCTGTTGCAATATTACGATGGCGAAGCAGAGATGCCCGGCGGTCTGTCCCGCGC
CGACTACGACGCCGATCGCTGGCAGTCCACGCGCCCTTATGACCGTTTCTGGGGCCGCCGCCAGCTTGCCAGCCTGGGCT
ATCAGTATCAGCCAGACAGCCAGCACAAGTTCACGGTTCAGGGCTTTTACACCCGCACCCTGCGCAGCGGCTTTTTACAA
CAAGGGAAGCGCATTACCCTCTCCCCGCGCGACTACTGGGTGCGCGGCATTGAACCGCGCTACAGCCAGAGCTTTATGCT
CGGCGCTTCGGCGCACGAAGTTGGCGCTGGCTACCGCTATGTCAGTGAATCGACGCATGAAATGCGTTACTACGCGCCCA
CCGCAGGCAAACAGTTGCCCTCCACCTCCAGTCCGTACGATCGCAACACGCGCTCCGGCACCGGGGCGCACGCCTGGTAT
CTTGATGACAAAATCGATATCGGTAACTGGACCATCACCCCAGGGATGCGTTTCGAACATATTCGTTCTTACCAGGACAA
CAACATCAAAGGCACGCGCGAAGAGGTGAGCTATAACGCCCCGTTTCCGGCATTTAACGTCCTGTATCACCTGACAGACA
GCTGGAATCTGTATGCCAACACCGAAGGCTCGTTCGGGACCGTACAGTACAGTCAAATTGGCAAGGCTGTGCGAAGCGGC
AATGTGGAGCCGGAAAAAGCGCGAACCTGGGAAGTCGGCACCCGCTTCGACAACGGCACGCTGAGCGCCGAAATGGGGCT
ATTCCTGATTAACTTTAATAATCAGTACAACTCCAGTCAGATCAACGACACGGTGACCGCGCGCGGGAAAACCCGTCATA
GCGGACTGGAAACGCAGGTGCGTTATCAGCTCGGCGAAATAACGCCCATACTGGAGAGTGTCTCCGTCTACGCCAACTAC
GCCTACGTAAACGCCGTCATCCGCGAAAAAGGCGACACCTATGGCAACCAGGTGCCCTTCTCGCCGAAGCATAAAGGCAG
CCTGGGCGTGGATTACCGGCCTGGCAACTGGAGCTTCAACCTGAGCAGCGATTTCCAGTCCAGTCAGTTTGCGGATAACG
CTAACACCAACAAAGAGAGCGCCGACGGCAGTACCGGACGTATTCCGGGCTACATGCTGTGGGGCGCGCGGGTGGCCTAT
GACTTTGGCCCGCAGGCCGCCAACCTGAACCTTGCCTTCGGGGTGAAGAACCTTTTCGACCAGGAGTATTACACCCGCGC
CTATGACGATAACAACAAAGGGATCTATGCCGGGCAGCCGCGCACGCTGTACCTGCAGGGGTCATTGACGTTCTGA

Protein sequence :
MTVHNTVPLAKAMRSGLLPLIGLLSLPAFAARFDIAAGDLDKALNQYAAESGIMLSVDASLTRGKRSHGLHGDFAHEEGL
YTLLQGSGLQVKSLDNNAWTLEPAAAGAEDSLTVVGDWLGEARENDVFEHAGARDVIRHDEANKTGATTVREALNRIPGV
NAPENNGTGSHDLALNFGIRGLNPRLASRSTVLMDGIPLPFAPYGQPQLSLAPVSPGNMDAIDVVRGGGAVRYGPQSVGG
VVNFVTHAIPQDFGIKASMEGLQSPQSSQNNPKETHSLLVGGTAENGFGAALLYSGTRGSDWREHSDTRIDDVLLKSKYA
PNEAHTFNSLLQYYDGEAEMPGGLSRADYDADRWQSTRPYDRFWGRRQLASLGYQYQPDSQHKFTVQGFYTRTLRSGFLQ
QGKRITLSPRDYWVRGIEPRYSQSFMLGASAHEVGAGYRYVSESTHEMRYYAPTAGKQLPSTSSPYDRNTRSGTGAHAWY
LDDKIDIGNWTITPGMRFEHIRSYQDNNIKGTREEVSYNAPFPAFNVLYHLTDSWNLYANTEGSFGTVQYSQIGKAVRSG
NVEPEKARTWEVGTRFDNGTLSAEMGLFLINFNNQYNSSQINDTVTARGKTRHSGLETQVRYQLGEITPILESVSVYANY
AYVNAVIREKGDTYGNQVPFSPKHKGSLGVDYRPGNWSFNLSSDFQSSQFADNANTNKESADGSTGRIPGYMLWGARVAY
DFGPQAANLNLAFGVKNLFDQEYYTRAYDDNNKGIYAGQPRTLYLQGSLTF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecA AAL08456.2 FecA Not tested SRL Protein 0.0 85

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fecA YP_003366898.1 iron(III) dicitrate TonB-dependent receptor VFG1047 Protein 0.0 85