Gene Information

Name : ROD_07971 (ROD_07971)
Accession : YP_003364421.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 876046 - 876969 bp
Length : 924 bp
Strand : -
Note : -

DNA sequence : 
ATGCCCACTCCCGTTCCTAATAAAATGTTGCCGGTTCCGTCACTACGCAACATCCAGGCATTTATTGAAGTGGCCGATAC
GGGCAGCCTTAATACTGCCGCGGAAAATCTCAACATTACCGCTTCCGCCGTCAGCCATCAGATTGCGAGTCTGGAGAATT
TTCTGGGCAAAAAATTATTTTCCCGCAGCAGTAAAGGCGTAAAGCTGACCACCATCGGCGAACGCTACCTGAAAGAAGTG
TCTGGCGCGCTAAATATGATTGGCCAGGCCACTAACCAGGTGATTCATGACATTCATCAGGATTATTTACGCATCCACTC
CGCGCCCAGCTTTGGCCTGCTCTGGCTGATGCCGCGGCTTGACCGCTTTCGCCAGGCGTGGCCTGAGCTGAAAATCAGCC
TGACCTGCTCCTATGAGAGCATCCAGTTTTCCCGCGACAATATTGATATCGACATTCGCCACGGCCTGGCGCAATGGCCG
ACGCTGGTGGTCAAAACCATTCGCAATGAAAGAATGCTTCCTTACACCTCCCAGGCCTGGCTGGAAAGCCATCCGCTGCA
AACCCCGGAAGATCTGCTGTCATGCGATCTGATCCACTCAGACAGCACCCTGATTAACTGGAACAACTGGTTCTCGTGGC
ACAAGGTGCGCGGCTTCAATAAAAATTTTATTTTTAATTTTGACCGCTCGTATATGAGCATCGAAGCTGCAAGGATGGGA
CTGGGCGTGATCCTTGAAAGTAATCTGCTGGCTGGCGAAAGCTTGCGCAAGCAGCACCTGCGGCCAGTCTTTGCCGACGA
TGTCAGCATGTCGGTGAATGCCCACCATCTGGTGATGCCGCACACCAGCGAGCAAAAAGCGAAAGTGAAAGCCTTTATCG
CGTGGATCTCTGAGGAACTCGACGCCGCAGGTTTCCAGATTTAA

Protein sequence : 
MPTPVPNKMLPVPSLRNIQAFIEVADTGSLNTAAENLNITASAVSHQIASLENFLGKKLFSRSSKGVKLTTIGERYLKEV
SGALNMIGQATNQVIHDIHQDYLRIHSAPSFGLLWLMPRLDRFRQAWPELKISLTCSYESIQFSRDNIDIDIRHGLAQWP
TLVVKTIRNERMLPYTSQAWLESHPLQTPEDLLSCDLIHSDSTLINWNNWFSWHKVRGFNKNFIFNFDRSYMSIEAARMG
LGVILESNLLAGESLRKQHLRPVFADDVSMSVNAHHLVMPHTSEQKAKVKAFIAWISEELDAAGFQI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96097.1 lysR family transcriptional regulator Not tested T-PAI Protein 2e-66 48
unnamed AAT96053.1 lysR family transcriptional regulator Not tested T-PAI Protein 1e-66 48
unnamed AAT96226.1 lysR family transcriptional regulator Not tested T-PAI Protein 1e-66 48
unnamed AAT96174.1 lysR family transcriptional regulator Not tested T-PAI Protein 1e-66 48
unnamed AAT96114.1 lysR family transcriptional regulator Not tested T-PAI Protein 1e-66 48