Gene Information

Name : ROD_08001 (ROD_08001)
Accession : YP_003364424.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3959
EC number : -
Position : 879433 - 880278 bp
Length : 846 bp
Strand : +
Note : -

DNA sequence : 
ATGAATATGACAGAAGTTCAGAAAGTGGCGGCGGCGGCCTGGCGCATTCGTCGCTATGCCCTGCGCATGGGGGAAGTTCA
GGGGCAGGGGTACATCGGTCAGGCGCTGGGCTACGCCGATGTGCTGGCGACCGCTTTCAGCCACGCGATGACCTGGCGCG
CGCAGGATGCGGAGTGGGAAGGGCGCGATCGCTTCCTGCTGTCTCACGGTCACTATGCCATCGCCTACTATGCGGCGCTG
CTGGAGGCCGGGATCATTCCTGAGGCGGAGCTGGAAACCTATGGGTCGGACGACAGCCGTCTGCCAATGTCCGGCATGGC
GACCTATACGCCGGGGATGGAGATGTCCGGCGGTTCGTTGGGGCAGGGGCTGTCTATTGCGGTAGGGATAGCGCTGGGGC
TGAGGCAGAAACAGAGCCCGTCATGGGTGTATAACTCGATGTCAGATGGCGAACTGGATGAAGGTTCCACCTGGGAAGCG
GCGATGTCGGCGGCGCACTACGGGCTGACCAACCTGATCAACATCGTTGATGTGAACAGGCAGCAGGCCGACGGCGATTC
GCGCAAAATCCTCGGCTTTGAGCCGCTGCACGAAAAATGGGCGGCTTTCGGCTGGTACGTGCAGCGCATCGACGGCAACG
ACGTCGCCGCCGTGGTCAATGCGTTTGATAACGCGAAAAATCATCGCGGCGAACAGCCTCGGGTCATTATCTGCGACACG
CTGATGGGTAAAGGCGTTCCGTTCCTCGAAACGCGCGATAAGAACCATTTTATTCGTGTTGATGCTGACGAATGGCAGAA
AGCGATAGCCGTGCTCGATGCCAACAAACCGGAAGGAGTGCTGTAA

Protein sequence : 
MNMTEVQKVAAAAWRIRRYALRMGEVQGQGYIGQALGYADVLATAFSHAMTWRAQDAEWEGRDRFLLSHGHYAIAYYAAL
LEAGIIPEAELETYGSDDSRLPMSGMATYTPGMEMSGGSLGQGLSIAVGIALGLRQKQSPSWVYNSMSDGELDEGSTWEA
AMSAAHYGLTNLINIVDVNRQQADGDSRKILGFEPLHEKWAAFGWYVQRIDGNDVAAVVNAFDNAKNHRGEQPRVIICDT
LMGKGVPFLETRDKNHFIRVDADEWQKAIAVLDANKPEGVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96229.1 transketolase Not tested T-PAI Protein 2e-73 69
unnamed AAT96117.1 transketolase Not tested T-PAI Protein 2e-73 69
unnamed AAT96177.1 transketolase Not tested T-PAI Protein 1e-73 69
unnamed AAT96056.1 transketolase Not tested T-PAI Protein 7e-74 69
unnamed AAT96100.1 transketolase Not tested T-PAI Protein 4e-74 69