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Name : secD (XALc_1928) Accession : YP_003376407.1 Strain : Xanthomonas albilineans GPE PC73 Genome accession: NC_013722 Putative virulence/resistance : Unknown Product : secd export membrane protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 2254259 - 2256103 bp Length : 1845 bp Strand : - Note : - DNA sequence : ATGCTCGAGTTTCCGCGCTGGAAATATGTCCTCATTCTGATCGTGCTTGGGTTGAGCGCGTTGTACGCGCTGCCGAACGT GTACCAGAAGGATCCGTCGGTCCAGATCACCGCCAGCCGCGGCGGCAAGCTCGACGATGCCCTGCGCGAACGGGTCCTCG CCGACCTGAAGGCGGCCGGGATCACTCCCAAGTCGGTGGCCAACGAAGGCGACAGCCTGATGGTGCGGTTGCCGACCCTG CAGGCGCAGACCCGCGCCAACGACATCCTGCGCGAGCAGGTGGGCGAAAACTACACGGTGGCGCTGAACCTGGCCTCGAC CGTGCCAGGTTGGCTGTCCAAGCTCGGCGGCAAGCCGATGGTGTTGGGCCTAGACCTGGTCGGCGGTGTGCATTTCGCGT TGCAGGTGGATCAGAAGGCTGCGCTGGAGAAGCGCCTGGACGCCTTCGCCGAAGACCTCCGCACCACGTTGCGCGATAAC CGCATTCCCTACCGTTCGGTGGAACGTCGGCCAGACAACAGCATCCAGGCCAACCTGGGCGAAGGCGCCGATGCCAGCGC CGCACGCGCCCTTCTGGCCAAGGCGCAGCCAACGTTGAGCTACGCCGTGTCCGGGCAGACCATCGCGGTGACTGTGCCCG ATGCCGAGCTGAAGCAGATCGCCGCTGGCGCCATCGAGCAGAACCTGACCACTTTACGCAACCGCGTCAACCAGTTGGGC GTGGCCGAGCCGATCATCCAGCGCCAGGGCGAGGACCGTATCGTGGTCGAGTTGCCGGGCGTACAGGACACCGCCGAGGC CAAGCGCATGATCGGTGCCACCGCTACCTTGGAGTTCCGTGGCGTGGTCGATGGCAATGCCGAGGATGCGGTGCGCTCCG GCAACATTCCGGCCGAGGCCAAAGTTTACTATCGGCGCGACAATGGCGCGCCGGTGCTGCTGAACAAGCGTGTGCTGGTG TCAGGCGATCAAATGGTCAACGCCAGCGTCAGCATCGATCAGAATGGCTTGCCGGCGGTGGCGGTGACGCTCAATAACGT CGCCGGTCAGCGCATGTTCGATTACACCAGCGCCAACACCGGCAAGCTGATGTCGGTGGTCTACATCGAACGCATTCCGA CCGTCACCATGGTCGATGGCAAGGAAGTGCGCAGCGTTCGGGTCAAGGAAGAGGCATTGGCGCCGACCCGCATCGCTGGT GTGTTCGGCAAGAATTTCCAGACCACCGGCCTGGAGAAGACCGAGGCAGAGAATCTGGCCAAGTTGCTGCGTGCTGGTTC GCTGGCTGCGCCGATGGACTTCGTCGAGGAATATGTCATCGGTCCCAGCCTGGGCGCCGAGAACGTGGAGCGGGGCATCA CCGCTGTGGTCTATGCGTTCCTGTTCACCCTGGTGTTCTTCGGCGTGTACTACCGCATGTTCGGTGCGATCACCTCGGTA GCCTTGCTGATGAACCTGCTGATCGTGGTTTCGGTGATGTCGCTGTTCGGTGCCACCATGACGTTGCCGGGCTTCGCCGG TCTGGCTCTGTCGGTGGGCTTGTCGGTGGACGCCAACGTGCTGATCAATGAGCGTATCCGCGAAGAGTTGCGTTTGGGCG TGCCGCCCAAGTCGGCGATTGCGTCTGGTTACGAAAAGGCCGGCGGCACCATCCTCGACGCCAACCTCACCGGCCTGATC GTGGGCGTGGCGCTGTACGCGTTCGGCACCGGTCCGTTGAAGGGCTTTGCGTTGACCATGATCATCGGCATCTTCGCCTC GATGTTCACCGCGATCACCGTGTCGCGTGCGCTGGCGGTGCTGATCTACGGCCGTCGCAAGAAGCTCAAGTCCGTGGCGA TTTGA Protein sequence : MLEFPRWKYVLILIVLGLSALYALPNVYQKDPSVQITASRGGKLDDALRERVLADLKAAGITPKSVANEGDSLMVRLPTL QAQTRANDILREQVGENYTVALNLASTVPGWLSKLGGKPMVLGLDLVGGVHFALQVDQKAALEKRLDAFAEDLRTTLRDN RIPYRSVERRPDNSIQANLGEGADASAARALLAKAQPTLSYAVSGQTIAVTVPDAELKQIAAGAIEQNLTTLRNRVNQLG VAEPIIQRQGEDRIVVELPGVQDTAEAKRMIGATATLEFRGVVDGNAEDAVRSGNIPAEAKVYYRRDNGAPVLLNKRVLV SGDQMVNASVSIDQNGLPAVAVTLNNVAGQRMFDYTSANTGKLMSVVYIERIPTVTMVDGKEVRSVRVKEEALAPTRIAG VFGKNFQTTGLEKTEAENLAKLLRAGSLAAPMDFVEEYVIGPSLGAENVERGITAVVYAFLFTLVFFGVYYRMFGAITSV ALLMNLLIVVSVMSLFGATMTLPGFAGLALSVGLSVDANVLINERIREELRLGVPPKSAIASGYEKAGGTILDANLTGLI VGVALYAFGTGPLKGFALTMIIGIFASMFTAITVSRALAVLIYGRRKKLKSVAI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 3e-108 | 44 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 3e-108 | 44 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 3e-108 | 44 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 4e-108 | 44 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 3e-108 | 44 |
