Gene Information

Name : Slin_1998 (Slin_1998)
Accession : YP_003386842.1
Strain : Spirosoma linguale DSM 74
Genome accession: NC_013730
Putative virulence/resistance : Unknown
Product : glyceraldehyde-3-phosphate dehydrogenase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0057
EC number : 1.2.1.12
Position : 2411773 - 2412765 bp
Length : 993 bp
Strand : -
Note : KEGG: geo:Geob_2897 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase

DNA sequence :
ATGGAAAAAATACGCGTTGCTATTAACGGCTTTGGCCGTATTGGGCGGTTATCGTTCAGACGACTACTAGAAAAAGAAAA
CATAGAAGTAGTCGCTATCAATGACCTAACCGATAATGCGACATTAGCTCACCTGCTTAAGTATGACTCTGTTCACGGCA
AATTCTCCGGAACAGTTGCTTCTGATGGCGATAGTCTGACCGTAAATGGCGTTAGAATTAATGCATATGCTGAGCGTGAC
CCCAAGAATCTTCCCTGGAGTGCATTAAACGTTGATGTTGTTCTGGAATCAACCGGACGATTCGTTGACGAAGCTGGTGC
AGGTATGCACCTACAGGCTGGCGCTAAAAAGGTAGTTATCTCTGCTCCTGCTAAAGGAAATATTCCAACAGTAGTATTAG
GTGTAAACGATGACACCTTAACGGGCGAGGAAACAATTATTTCCAATGCTTCCTGCACAACCAACTGCCTCGCACCAATG
GCGAAAGTACTGGATGACGTTTTCGGGATCGAAAAAGGTTACATGACAACCATTCACGCTTACACGGCAGACCAGAATTT
GCAGGATGCTCCCCACTCTGATCTTCGCCGGGCCAGAGCTGCCGCCTTATCAATTGTACCGACCTCAACAGGAGCCGCGA
AAGCTGTAGGACTCGTTCTTCCACAATTAAAAGGCAAACTTGATGGTAACGCCATGCGTGTACCGACTCCAGATGGTTCT
TTAACCGATCTGACAGTTGTTTTGAAACGGGAAGCTTCGATTCAGGAAATTAATGATGCGATCAAACAGGCGTCGGAAAC
TACGTTGAACGGCATCCTTGAGTACTGCACGGACGAAATTGTATCGATTGACATTGTAGGTAATCCACATTCCTGCATTT
TCGACTCAAAATTGACAGCTGCCAACGGTACACTGGTTAAAGTTGTAGGCTGGTATGATAACGAGTACGGTTACTCTAGC
CGTGTTGCTGATCTTATCGCTAAGCTATTTTAA

Protein sequence :
MEKIRVAINGFGRIGRLSFRRLLEKENIEVVAINDLTDNATLAHLLKYDSVHGKFSGTVASDGDSLTVNGVRINAYAERD
PKNLPWSALNVDVVLESTGRFVDEAGAGMHLQAGAKKVVISAPAKGNIPTVVLGVNDDTLTGEETIISNASCTTNCLAPM
AKVLDDVFGIEKGYMTTIHAYTADQNLQDAPHSDLRRARAAALSIVPTSTGAAKAVGLVLPQLKGKLDGNAMRVPTPDGS
LTDLTVVLKREASIQEINDAIKQASETTLNGILEYCTDEIVSIDIVGNPHSCIFDSKLTAANGTLVKVVGWYDNEYGYSS
RVADLIAKLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
epd AAO17215.1 Epd Not tested tcd island Protein 1e-56 43