Gene Information

Name : Slin_4051 (Slin_4051)
Accession : YP_003388838.1
Strain : Spirosoma linguale DSM 74
Genome accession: NC_013730
Putative virulence/resistance : Unknown
Product : cysteine desulfurase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1104
EC number : 2.8.1.7
Position : 4868573 - 4869715 bp
Length : 1143 bp
Strand : -
Note : PFAM: aminotransferase class V; KEGG: kpe:KPK_1257 cysteine desulfurase

DNA sequence :
ATGGATTTCATTTATCTCGATAATAATGCCACTACACGGGTCGCGCCAGAGGTATTGAATGCGATGCTGCCGTATTTGTC
AGATTATTACGGTAATGCGGCTAGTTCGCATGGGTTCGGCAAGACGATAAATGATGCTGTTAAATTAGCACGTGCTCAGG
TGGCCGATTTGATAGGTTGCCAGTCAACAGAAATAGTATTCACCTCCGGGGCTACTGAGTCTATTAATTTAGCTATTAAA
GGAGTTGCTGAAAGCTACCAGAATAAGGGCCGACATATTATTACGGTTCAAACTGAGCATCCTGCGGTATTAGATGTTTG
CCGATTCCTGGAGTCTCACGGCTATGAGCTGACGTATCTATCTGTCGGTCGTGATGGCTTAATTGACCTTTCTGAACTTG
ACGCTCACCTTCGTTCTGACACGATTTTAGTGTCTGTCATGGCCGTTAACAATGAGACAGGCGTACAGCAGCCAATACAG
CAAATTGCTGAACGAGCGCATCGTGTCGGTGCTCTTTTTATGTCTGATGCTACACAGGCAGTAGGTAAAGTCCCCATCTT
AGTTGACGAGTACGATATCGATATTTTGGCCTTCTCCGCTCACAAGTTTTATGGTCCAAAAGGCGTTGGAGGCTTATTTA
TCCGGCAACGTTCGCCAAGGCGGGTAAAAGTCGAGGCTACTATGCACGGCGGAGGACACGAAAGAGGTTTGCGCAGTGGT
ACCCTGAATGTGCCAGGTATTGTTGGTTTGGGCAAAGCTTGTGAATTGGCGGTAGCCGAAATGAGGAATGATGCTGTTCG
GGTTGGTACTCTTCGGGATAAACTGGAAATAGACCTACTCAAATCAGATGGTTCATTTGTTAATGGCGATGCGAAGAGTC
GCTTATACAATGTCACAAACATTAGTTTCCCTGACGTGGACGCTAATGTGTTGATTGGTCAGTTAAAAAAACTAGCCGTA
TCAAATGGTTCAGCCTGTTCATCGGCTGTGTTTGAACCATCCTATGTATTGAAAGCAATGGGATTGACGGATGATGAAGC
GCTAGGGGCTATTCGATTTTCTCTTGGGCGGTATACTACTGAAGAAGACATACAGGGAGCGGTTGAGGCCATAAAACAAA
CCATTCATGCTGTCCGATATTGA

Protein sequence :
MDFIYLDNNATTRVAPEVLNAMLPYLSDYYGNAASSHGFGKTINDAVKLARAQVADLIGCQSTEIVFTSGATESINLAIK
GVAESYQNKGRHIITVQTEHPAVLDVCRFLESHGYELTYLSVGRDGLIDLSELDAHLRSDTILVSVMAVNNETGVQQPIQ
QIAERAHRVGALFMSDATQAVGKVPILVDEYDIDILAFSAHKFYGPKGVGGLFIRQRSPRRVKVEATMHGGGHERGLRSG
TLNVPGIVGLGKACELAVAEMRNDAVRVGTLRDKLEIDLLKSDGSFVNGDAKSRLYNVTNISFPDVDANVLIGQLKKLAV
SNGSACSSAVFEPSYVLKAMGLTDDEALGAIRFSLGRYTTEEDIQGAVEAIKQTIHAVRY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96060.1 cysteine desulfurase Not tested T-PAI Protein 7e-77 49