Gene Information

Name : Slin_0975 (Slin_0975)
Accession : YP_003385825.1
Strain : Spirosoma linguale DSM 74
Genome accession: NC_013730
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3958
EC number : -
Position : 1188555 - 1189508 bp
Length : 954 bp
Strand : -
Note : PFAM: transketolase; transketolase; KEGG: pca:Pcar_2719 transketolase, C-terminal subunit

DNA sequence : 
ATGAAAAAATACGAATACACGGAGAAGAAAGATACACGTTCGGGATTCGGCGCGGGCATTGCCGAGTTGGGCCGCTCAAA
CCCCAACGTTGTTGCACTAACGGCCGATCTGGCCGGTTCCCTAAAACTGGATACGTTCATTAAAGAAAACCCCGAGCGTT
TTGTTCAGTGCGGTATTGCCGAAGCTAACATGATTGGCGTGTCGGCGGGTCTTACTATTGGTGGACATATCCCCTTCGCT
ACCACGTTCGCCAATTTTGCTACCGGCCGGGTATATGACCAGATTCGGCAGTCGGTGGCGTACTCGAATAAGAATGTAAA
AATATGCGCTTCTCACGCAGGCTTGACCCTGGGCGAAGATGGCGCCACGCACCAGATTCTGGAAGATTTGGGCATGATGA
AAATGCTGCCTAACATGACCGTCATCAATCCCTGCGATTATAACCAGACTAAAGCAGCTACGCTAGCCATTGCTGACCAT
GTTGGTCCGGTTTATCTGCGTTTTGGCCGGCCGGTGATTCCAGTATTTACCCCAGCTGACCAGAAGTTTGAGATTGGTAA
AGCCTGGACGGTTAACGAAGGTAAAGACGTTTCTATCTTCTGCACGGGACACCTCGTTTGGGAAGCGATCAAAGCCGGTG
AAATCCTGGCCGAAGAAGGAATTGAAGCCGACATTATCAACATTCACACGATTAAACCGTTAGATGAAGAGGCCATTCTG
GCATCGGTCAAGAAAACGGGTTGTGCGGTATCGGCCGAAGAACACATGATCAATGGCGGTCTGGGCGATAGTGTAGCCCA
GGTTCTGGCCCGGAACTACCCCGCTCCGCTCGAATACATAGGTGTTCATGATACCTTCGGCGAAAGCGCGACACCCGACC
AACTGATGCAAAAATATGGCCTTACTGCTGACAAGATTGTTGAGCAGGTGAAGAAAGCAATAGCAAGAAAATAA

Protein sequence : 
MKKYEYTEKKDTRSGFGAGIAELGRSNPNVVALTADLAGSLKLDTFIKENPERFVQCGIAEANMIGVSAGLTIGGHIPFA
TTFANFATGRVYDQIRQSVAYSNKNVKICASHAGLTLGEDGATHQILEDLGMMKMLPNMTVINPCDYNQTKAATLAIADH
VGPVYLRFGRPVIPVFTPADQKFEIGKAWTVNEGKDVSIFCTGHLVWEAIKAGEILAEEGIEADIINIHTIKPLDEEAIL
ASVKKTGCAVSAEEHMINGGLGDSVAQVLARNYPAPLEYIGVHDTFGESATPDQLMQKYGLTADKIVEQVKKAIARK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96118.1 transketolase Not tested T-PAI Protein 1e-36 43
unnamed AAT96057.1 transketolase Not tested T-PAI Protein 4e-41 41
unnamed AAT96101.1 transketolase Not tested T-PAI Protein 4e-41 41
unnamed AAT96230.1 transketolase Not tested T-PAI Protein 2e-28 41