Gene Information

Name : Gobs_1717 (Gobs_1717)
Accession : YP_003408802.1
Strain : Geodermatophilus obscurus DSM 43160
Genome accession: NC_013757
Putative virulence/resistance : Unknown
Product : transketolase central region
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3958
EC number : -
Position : 1780063 - 1781106 bp
Length : 1044 bp
Strand : +
Note : PFAM: Transketolase central region; Transketolase domain protein; KEGG: sen:SACE_4351 transketolase, C-terminal subunit

DNA sequence :
ATGACCAGCACCGCCCCCCGCAACAAGCTCACCACCTCGGCGATGATCGCCTCCTTCGCCGACCCCGGTCAGCGCACCAC
CAGCGCACCGTTCGGGCACGCGCTCAACCGCCTGGCGGAGGAGCGGCCGGAGATCGTCGGGCTGTCGGCCGACCTGGCGA
AGTACACCGACATGCACGTGTTCCGCGACGCCCATCCCGACCGGTTCTTCCAGATGGGCATGGCCGAGCAGTCGCTGCTC
GGGGCCGCGGCCGGGATGGCGGAGGTCGGGCTGGTGCCCTTCGCCTCCACCTACTCGGTGTTCGCCACCCGGCGGGCCTA
CGACTTCCTCTGCCTCGACATCGCCGAGCCGAACCTGAACGTCAACGTCGTCGGCGGCCTGCCCGGCCTCACCACCGGGT
ACGGTCCCAGCCACCAGGCCACCGAGGACCTGGCGATCCTCCGCGGTTGCCCGAACCTGACCATCGTCGACCCGTGCGAC
TCCGTCGACATCGAGCAGGCCGTGCCGGCCCTGGCCGACGCACCCGGCCCCACCTACCTGCGGCTGCTGCGCGGCGCGGT
GCCCACCGTGCTCGACGAGTACGACTACCGGTTCGAGCTGGGCAAGGCCGCCGAGCTGCGCACCGGCCGGGACGTCGTGC
TCATCTCCACCGGCCTGATGACCATGCGGGCGCTGCAGGCCGCGGCCCGGCTGGAGGCCGACTCCGTCGACGTCGCCGTC
CTGCACGTCCCGACGATCAAGCCGCTGGACACCGAGGCGATCCTGCGGGCGGCCCGCACCGACCGGCTCGTGGTGACGCT
GGAGAACCACACCGTGGTCGGCGGCCTGGCCGAGTCGGTCGCGTCGACGCTGGCCTTCGCCGGCGTCGGGACGCGCGTGG
TGCCGATCGCGCTGCCCGACGAGTTCCTCGCCGCCGGCGCCCTGCCCACCCTGCACGACCGCTACGGGCTGTCGACCGAC
GCCGTCATCGCCAAGGTCAAGGCCGAGCTGGGCGGCGGCACGCACGCCCCCTGGGCCGCCGACCCCGACCCGGCCACCGC
CTGA

Protein sequence :
MTSTAPRNKLTTSAMIASFADPGQRTTSAPFGHALNRLAEERPEIVGLSADLAKYTDMHVFRDAHPDRFFQMGMAEQSLL
GAAAGMAEVGLVPFASTYSVFATRRAYDFLCLDIAEPNLNVNVVGGLPGLTTGYGPSHQATEDLAILRGCPNLTIVDPCD
SVDIEQAVPALADAPGPTYLRLLRGAVPTVLDEYDYRFELGKAAELRTGRDVVLISTGLMTMRALQAAARLEADSVDVAV
LHVPTIKPLDTEAILRAARTDRLVVTLENHTVVGGLAESVASTLAFAGVGTRVVPIALPDEFLAAGALPTLHDRYGLSTD
AVIAKVKAELGGGTHAPWAADPDPATA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96118.1 transketolase Not tested T-PAI Protein 9e-85 71
unnamed AAT96057.1 transketolase Not tested T-PAI Protein 1e-96 70
unnamed AAT96101.1 transketolase Not tested T-PAI Protein 4e-97 69