Gene Information

Name : Gobs_4799 (Gobs_4799)
Accession : YP_003411707.1
Strain : Geodermatophilus obscurus DSM 43160
Genome accession: NC_013757
Putative virulence/resistance : Unknown
Product : FAD linked oxidase domain-containing protein
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0277
EC number : -
Position : 5010222 - 5011709 bp
Length : 1488 bp
Strand : +
Note : PFAM: FAD linked oxidase domain protein; KEGG: sen:SACE_6366 glycolate oxidase subunit

DNA sequence :
ATGACCGCCATCGCCGAACCGGCTGTCTCCCATCGCACCGCCGCGCTGGCCGACCGGCTCCGGACGGCGGTCGGCACCGA
GCGGGTGCTGACCGACCGCACCCAGGTCCGTACCTACGAGTGCGACGGGCTGGCCAACTTCAAGGTCACCCCGGCGATCG
TGGTGCTGGCCGAGAGCCGGCAGCACGTCGTCGACACCGTCCGGCTCTGCGCCGAGGCCGGCGTGCCCTTCGTGGCACGC
GGCTCGGGCACCGGCCTGTCCGGCGGCGCGCTGCCGAGCGCCGACGGCGTCCTGCTGGTGCTGTCGCGGTTGCGCGCGCT
GTCCCCGGTGGACGCGGACAACCGCCAGGTCACCGTCGAGCCCGGGGTCATCAACCTGTGGGTCACCCGTGACGCGGCGC
CCTACGACCTGGCCTACGCACCCGACCCGTCGTCCCAGCTGGTCTGCTCCATCGGCGGGAACGTGGCCGAGAACGCCGGG
GGCGCGCACTGCCTGAAGTACGGCTTCACGGTCAACCACGTCCTCGGCGCCGAGGTGGTGCTGCCCGACGGGGAGGTCGT
CCACCTGGGCGGGCGCGCTCCCGAACACCCCGGCTACGACCTGCTGGGCGCCTTCATCGGCAGCGAGGGCACGCTGGGGG
TGGCCACCGAGCTGACCCTGCGGCTGATCCGGGTGCCGGAGGCGGTGCAGACCATGCTGGTCGGCTACTCCTCGGTCGAG
GACGCCGCCGGCACGGTCAGCGACATCATCGCCGCCGGGATCCTGCCGGCCGCCGTGGAGATGATGGACGCCCTGGCCAT
CGAGGCCGCCGAGGCCGCGGTGAGCTGCGGCTACCCGGCGGGCGCGGTGGCGGTGCTGGTCATCGAGCTCGACGGCCCGC
AGGTCGAGGTCGAGGCCCAGTTCAAGCAGGTCGAGGACATCGCCCGGGCCCGCAACGCCTTCGAGACGCGCATCGCGCCC
GACGACGCGGAGCGGGCGCTGATGTGGAAGGGCCGCAAGTCGGCGTTCGCGGCGGTCGGCCGGATCAGCCCGAGCTACTT
CGTGCAGGACGGCGTCATCCCCCGCACGAAGCTCCCCGAGGTGCTGGCCGAGATGAAGCGCATGGCCGACGAGAAGGGGC
TCCGCGTCGCCAACGTCTTCCACGCGGGCGACGGCAACCTGCACCCGCTCGTGCTGTTCGACGACGCGGTCGAGGGCCAG
GCGCACGAGGCCGAGGAGCTGGCCGGCGACATCCTCGAGCTCTGCGTCACCTCCGGCGGCTCGATCACCGGCGAGCACGG
GGTGGGCAGCGAGAAGCGCATGAAGATGGCCAAGCAGTTCACCGCCGAGGACCTCGACACGATGCAGCTGCTGCGGTGCG
CGTTCGACCCCGACGGCATCGCCAACCCGGGCAAGGTCTTCCCGACCCCGCGGTTGTGCGGAGAGCGGCCCGGCGTCCGC
AAGGGCGAGCACCCGGTGCAGGCAGCCGGCCTGGGCGAGGTCTTCTGA

Protein sequence :
MTAIAEPAVSHRTAALADRLRTAVGTERVLTDRTQVRTYECDGLANFKVTPAIVVLAESRQHVVDTVRLCAEAGVPFVAR
GSGTGLSGGALPSADGVLLVLSRLRALSPVDADNRQVTVEPGVINLWVTRDAAPYDLAYAPDPSSQLVCSIGGNVAENAG
GAHCLKYGFTVNHVLGAEVVLPDGEVVHLGGRAPEHPGYDLLGAFIGSEGTLGVATELTLRLIRVPEAVQTMLVGYSSVE
DAAGTVSDIIAAGILPAAVEMMDALAIEAAEAAVSCGYPAGAVAVLVIELDGPQVEVEAQFKQVEDIARARNAFETRIAP
DDAERALMWKGRKSAFAAVGRISPSYFVQDGVIPRTKLPEVLAEMKRMADEKGLRVANVFHAGDGNLHPLVLFDDAVEGQ
AHEAEELAGDILELCVTSGGSITGEHGVGSEKRMKMAKQFTAEDLDTMQLLRCAFDPDGIANPGKVFPTPRLCGERPGVR
KGEHPVQAAGLGEVF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcD CAE85245.1 GlcD protein Not tested PAI V 536 Protein 3e-95 51