Gene Information

Name : LM5578_1232 (LM5578_1232)
Accession : YP_003413344.1
Strain : Listeria monocytogenes 08-5578
Genome accession: NC_013766
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 1212306 - 1212581 bp
Length : 276 bp
Strand : +
Note : -

DNA sequence : 
ATGAATAATGCACTTGGAATGATTGAAACTAAAGGTCTTGTTGGCGCAATCGAAGCAGCTGACGCAATGGTTAAAGCGGC
AAATGTATCACTTGTAGGGTATGAAAAAATCGGTTCTGGACTTGTAACTGTCATGGTTCGCGGTGATGTAGGCGCAGTAA
AAGCAGCAACAGATGCAGGCGCAGCAGCAGCTCGTAACGTTGGCGAAGTACAATCTATCCACGTTATCCCACGTCCACAC
AATGATGTAGAAACATTGCTACCAAAAGGTTTATAA

Protein sequence : 
MNNALGMIETKGLVGAIEAADAMVKAANVSLVGYEKIGSGLVTVMVRGDVGAVKAATDAGAAAARNVGEVQSIHVIPRPH
NDVETLLPKGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 3e-14 67
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-13 65
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 2e-13 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LM5578_1232 YP_003413344.1 hypothetical protein VFG1596 Protein 1e-14 67
LM5578_1232 YP_003413344.1 hypothetical protein VFG1598 Protein 7e-14 65
LM5578_1232 YP_003413344.1 hypothetical protein VFG1597 Protein 7e-14 65