Gene Information

Name : LM5578_1239 (LM5578_1239)
Accession : YP_003413351.1
Strain : Listeria monocytogenes 08-5578
Genome accession: NC_013766
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1454
EC number : -
Position : 1217266 - 1218384 bp
Length : 1119 bp
Strand : +
Note : -

DNA sequence : 
ATGAACAGCTTTCAAATTAAAACAAAAGTAGCTTTTGGCACGAATAGTTTACAAGTTTTAAAAGAAATTAAAAATAAAAA
TGTCTGGATTATCTGTGACCGTTTTTTGGCTGATGGGGAAGGGCTTCAAGGTTTAATTGGACAATTGGATACATCTAATA
ATGTGCATATTTTCACCGATGTCGTACCTGATCCACCTATTTCCAAAGTAGCTGGAGGGGTTAGTGAGGCTGGCAAAATC
CAACCGCAAGTCATGATTGCTTTTGGTGGTGGTTCAGCGATTGATACGGCCAAAGGAATCTACTATTTTGCCAAGCGTTT
GGAAAAAATCAATATCAGTACTTTTATTGCAATTCCAACCACAAGTGGTACGGGATCGGAAGTTACAGCCGCAACTGTTA
TTACAGATCCAACAACGAAAATTAAATATCCACTTTTCTTAGATGAACTAATTCCGGATATGGCTATTTTGGATGCGCAG
CTAGTTGTTACGGTACCTCCAGCCATTACGGCGAACACTGGGATGGATGTCCTAACACACGCTATCGAAGCTTATGTCTC
TAAAGATGCGAGCGATTATACCGATGCTCTTGGTGAAAAAAGTGTGCAATTAACGTTACGTTTCTTAACGAGTTGTTATG
ATGATGGTCGTAATTTAGCGAATCGGGAAAAAATGCATAATGCGTCTACTATGGCTGGAATGGCATTTAACTGCGCCAAT
TTAGGCTTGAATCACAGTATTGCGCATCAACTTGGTGCACAGTTCCACGTACCCCACGGGCTAGCCAATGCGATTCTACT
GGATGCAGTGATTCGTTTTAACGCCTTTAAAAATCGCGAAACGGAACAAAAATATGCGGAGATGGCGCGCATTTGCGGCA
TTGCTTCCAGATCAGACTCGAACGAAACGGCAGTCCGCTTACTTCGCGAAAGAATCGTAGCGATGATGGAACATATGCAA
ATGCCACGGACGTTAACAGATGCTGGAGTAGCAAAAGAAAAAGTCTATGCAAAAATGGACGAAATTGCAACGAATGCACT
GAAAGACGCTTGCTTACCGACTAGTCCAACGACACCGACACATCAAGAGCTAAAAGAAATTTTAGAACAAATTATTTAG

Protein sequence : 
MNSFQIKTKVAFGTNSLQVLKEIKNKNVWIICDRFLADGEGLQGLIGQLDTSNNVHIFTDVVPDPPISKVAGGVSEAGKI
QPQVMIAFGGGSAIDTAKGIYYFAKRLEKINISTFIAIPTTSGTGSEVTAATVITDPTTKIKYPLFLDELIPDMAILDAQ
LVVTVPPAITANTGMDVLTHAIEAYVSKDASDYTDALGEKSVQLTLRFLTSCYDDGRNLANREKMHNASTMAGMAFNCAN
LGLNHSIAHQLGAQFHVPHGLANAILLDAVIRFNAFKNRETEQKYAEMARICGIASRSDSNETAVRLLRERIVAMMEHMQ
MPRTLTDAGVAKEKVYAKMDEIATNALKDACLPTSPTTPTHQELKEILEQII

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42074.1 hypothetical protein Not tested PAI II 536 Protein 8e-60 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LM5578_1239 YP_003413351.1 hypothetical protein VFG1593 Protein 5e-60 41