Gene Information

Name : LM5578_0927 (LM5578_0927)
Accession : YP_003413042.1
Strain : Listeria monocytogenes 08-5578
Genome accession: NC_013766
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : -
Position : 922856 - 923584 bp
Length : 729 bp
Strand : +
Note : -

DNA sequence : 
ATGACTAAACTTAAAGTAACTGGCTTGAAAAAGAGTTTTGGCGCAAATGAAGTGTTAAAAGGCATTGATATAGAAGTAAA
AGAAGGCGAAGTAGTTTGTGTAATCGGACCTTCTGGCTCAGGTAAAAGTACATTTCTTCGTTGCATGAATAACCTAGAAG
AAATTACAGCAGGTGAAGTAGTTGTTGATGATTTTAATATTACTGATAAAAAAGTAGATATTAATAAAGTTCGCGAAAAT
ATCGGCATGGTTTTCCAACATTTTAATCTTTTCCCACATTTGTCTGTTTTGGAGAACATCACATTAGCTCCCGTTGAATT
GAAAAAAATGGATAAAGAAGCCGCGAAAAGTAATGCCTTGCGTTTATTAGAACAAGTAGGATTACGAGAAAAAGCGGAAG
AATTTCCTAATCAACTTTCCGGTGGGCAAAAACAACGGGTGGCGATTGCGAGAGCACTTGCAATGGATCCTGACATTATG
TTGTTCGATGAGCCTACATCAGCCCTCGATCCAGAGATGGTGGGTGAGGTTTTAGGCGTTATGAAAGAATTAGCTAAAGG
CGGCATGACCATGATGATTGTTACGCATGAGATGGGCTTTGCTCGTGAAGTTGGCGACCGAGTTATCTTTATGGATGGTG
GCTATATTGTTGAAGAAGGCAAGCCGGCTGATATTTTTGATAACCCAACCAATGAAAGAACAATTAGCTTCTTAGATAAA
GTATTATAA

Protein sequence : 
MTKLKVTGLKKSFGANEVLKGIDIEVKEGEVVCVIGPSGSGKSTFLRCMNNLEEITAGEVVVDDFNITDKKVDINKVREN
IGMVFQHFNLFPHLSVLENITLAPVELKKMDKEAAKSNALRLLEQVGLREKAEEFPNQLSGGQKQRVAIARALAMDPDIM
LFDEPTSALDPEMVGEVLGVMKELAKGGMTMMIVTHEMGFAREVGDRVIFMDGGYIVEEGKPADIFDNPTNERTISFLDK
VL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LM5578_0927 YP_003413042.1 hypothetical protein CP001581.1.gene598.p Protein 1e-27 41
LM5578_0927 YP_003413042.1 hypothetical protein NC_012469.1.7686878. Protein 5e-29 41