Gene Information

Name : LM5923_1205 (LM5923_1205)
Accession : YP_003416409.1
Strain : Listeria monocytogenes 08-5923
Genome accession: NC_013768
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 1198107 - 1199567 bp
Length : 1461 bp
Strand : +
Note : -

DNA sequence :
GTGGCACTAGAAGATAAAGATTTACGCTCAATCCAAGAAGTTCGTAACCTCATTGAATCAGCTAACAAAGCACAAAAAGA
ACTTGCTGCAATGAGCCAACAACAAATTGATACAATTGTAAAAGCGATTGCTGATGCCGGTTATGGTGCTCGTGAAAAAC
TCGCAAAAATGGCACATGAAGAAACTGGTTTTGGAATTTGGCAAGACAAAGTAATTAAAAACGTCTTCGCTTCCAAGCAC
GTCTACAATTACATCAAAGATATGAAAACCATTGGTATGTTAAAAGAAGATAACGAAAAGAAAGTAATGGAGGTTGCAGT
TCCACTAGGTGTAGTTGCAGGATTAATTCCTTCTACAAACCCTACATCCACTGTTATTTACAAAACACTAATTTCGATTA
AAGCAGGAAATAGTATCGTATTTTCTCCACATCCAAACGCACTAAAAGCAATTCTTGAAACAGTAAGAATTATTAGTGAA
GCTGCAGAAAAAGCTGGTTGTCCAAAAGGCGCTATCAGCTGTATGACTGTTCCAACAATCCAAGGAACAGATCAACTGAT
GAAACACAAAGATACAGCAGTTATCCTTGCAACAGGTGGTTCTGCAATGGTAAAAGCGGCTTATTCATCTGGTACTCCAG
CAATTGGAGTTGGCCCAGGTAATGGCCCAGCATTTATCGAACGCAGTGCTAACATTCCTCGCGCAGTGAAACATATTCTT
GATTCCAAAACATTCGATAACGGAACAATTTGCGCATCTGAGCAATCTGTCGTTGTTGAACGTGTGAATAAAGAAGCTGT
CATTGCTGAATTTAGAAAACAAGGAGCACACTTCTTATCAGATGCAGAAGCTGTTCAACTTGGTAAATTCATCTTACGTC
CAAATGGTTCGATGAATCCAGCAATCGTAGGTAAAAGCGTGCAACATATCGCTAACCTTGCTGGTCTAACTGTTCCAGCT
GACGCAAGAGTACTTATCGCTGAAGAAACAAAAGTTGGCGCTAAAATCCCTTATTCAAGAGAAAAATTAGCTCCAATCTT
GGCTTTCTATACAGCCGAAACTTGGCAAGAAGCTTGCGAACTTAGCATGGATATTCTTTATCATGAAGGAGCTGGACATA
CTTTAATCATCCACTCTGAAGATAAAGAAATCATCCGCGAATTCGCACTGAAAAAACCAGTTTCCCGTCTTTTAGTTAAT
ACACCAGGAGCGCTTGGCGGAATTGGCGCAACAACAAATCTTGTACCTGCTTTAACACTTGGTTGTGGGGCAGTTGGAGG
AAGTTCATCATCTGATAATATCGGACCTGAAAATCTTTTCAACATTCGCCGCATCGCTACAGGAGTTTTAGAGTTAGAAG
ATATTCGTAAAGAAGAAAACCAAGCAACATCTGAACTTCCGGTTGATGCAGACGCACTGATCCAAAGTTTAGTAGAAAAA
GTTTTAGCAGAATTAAAATAA

Protein sequence :
MALEDKDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKH
VYNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISE
AAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAMVKAAYSSGTPAIGVGPGNGPAFIERSANIPRAVKHIL
DSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPA
DARVLIAEETKVGAKIPYSREKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRLLVN
TPGALGGIGATTNLVPALTLGCGAVGGSSSSDNIGPENLFNIRRIATGVLELEDIRKEENQATSELPVDADALIQSLVEK
VLAELK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42076.1 hypothetical protein Not tested PAI II 536 Protein 7e-124 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LM5923_1205 YP_003416409.1 hypothetical protein VFG1595 Protein 4e-124 56