Gene Information

Name : LD85_1262 (LD85_1262)
Accession : YP_003419303.1
Strain : Sulfolobus islandicus L.D.8.5
Genome accession: NC_013769
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1101895 - 1102572 bp
Length : 678 bp
Strand : -
Note : -

DNA sequence : 
ATGCCCGTAATAAGACTTGAAAATGTTACCAAGATTTATGAGGGGAATGTAAAGACTGTTGCGCTTAGAGATATAAACCT
AAGTATTGATGAAGGAGAGTTTATTTCAATATTGGGACCTTCTGGCAGTGGAAAATCAACTCTCTTATCAATCTTAGGAA
TTTTGGATAGACCATCACAAGGGAAGGTATATATTTATGAAATGGACGTAACTAAGCTAAGCGATAACGAAATCTCAAAA
ATCAGAAATGAGTATATAGGCTTTGTATTTCAGAATTTTAATCTAATTCAGAGGCTTAGTGTACTACAAAACGTCGAATT
ACCACTAGTAGCCAGAGGAATACCAAAAAAGAAAAGGGAGGAGATAGCAATAAATTCTCTAAAACTAGTGGAATTAGACG
GAGTAATAAACAAAAGACCGTCAGAACTTTCTGGGGGACAACAGCAAAGAGTAGCTATAGCTCGTGCATTAGCCCAAAAT
CCAAAGATCATATTAGCTGATGAACCTACTGGAAATTTAGATAGTATCAATGCAAAAATTGTAATGGACATATTCAAAAA
GATTAATGAGGAGTTTAAAACTACGATAGCAGTAGTAACACATGATAGAGAAGTTGCGAGTTTTACAAGGAGAAAGATCT
ACATCAGAGATGGAAAGATAGTTGGTGAAGAAAGATGA

Protein sequence : 
MPVIRLENVTKIYEGNVKTVALRDINLSIDEGEFISILGPSGSGKSTLLSILGILDRPSQGKVYIYEMDVTKLSDNEISK
IRNEYIGFVFQNFNLIQRLSVLQNVELPLVARGIPKKKREEIAINSLKLVELDGVINKRPSELSGGQQQRVAIARALAQN
PKIILADEPTGNLDSINAKIVMDIFKKINEEFKTTIAVVTHDREVASFTRRKIYIRDGKIVGEER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LD85_1262 YP_003419303.1 ABC transporter NC_012469.1.7686878. Protein 3e-47 49
LD85_1262 YP_003419303.1 ABC transporter NC_008702.1.4606598. Protein 7e-38 45
LD85_1262 YP_003419303.1 ABC transporter CP001581.1.gene798.p Protein 4e-35 44
LD85_1262 YP_003419303.1 ABC transporter CP001581.1.gene598.p Protein 6e-37 42
LD85_1262 YP_003419303.1 ABC transporter NC_012469.1.7686946. Protein 4e-23 41