Gene Information

Name : Kvar_4640 (Kvar_4640)
Accession : YP_003441544.1
Strain : Klebsiella variicola At-22
Genome accession: NC_013850
Putative virulence/resistance : Unknown
Product : oligogalacturonate-specific porin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4930861 - 4931613 bp
Length : 753 bp
Strand : -
Note : PFAM: oligogalacturonate-specific porin; KEGG: kpe:KPK_5054 oligogalacturonate-specific porin protein (KdgM)

DNA sequence :
ATGCGTACAAAAACCGCTTTTATTATGTGTTGCGTTCTTGGCATTCCTGCAGCCGGCCACGCGCTGACCTTTGATGTCAG
GGGAGGATATCGGGCGGGAAGCCACTCTTACGAGTCCCGCTATAAGGTCAGCCAGGGGTGGGAAACAGGCTGGTGGGCGA
GTATGGAGATGGATAACAAAAACAACAAAAATAACCATCAGGGCAACCAGGGTACCGACAGAGCTGATGGTTCCCACTCC
TTTGGCGACAGCACGGTCGATTATAATGAAATAGAGGCTAACTATAGCTGGCCATTCGCCGATAAATGGGCCTTGCAGCC
TGGCGGCATCTATCACTGGAGCAGCAAAGGCACTCAGCTACGGCCTTATCTGCGCGTTAATTATAAAGCCACGCCCGACC
TTACCTTTGGGCTGCGTTATCGCTATGACTACAACACTTATGAAACGGTCAATAGTGCCGGTGAGTCGCATCGGGATAGC
GTCAATCGTCTGGATTTATATGTTGCCTATAAATTTAATGCACAATGGAGCGCCTTATATCAAGGCACGGTCTATCGCCA
CGTCAATGACGACTATAAGTATAAAAATGATAAGTCTTCGGCGACAGAAAATGCGCTAACGCTACGCTATAAATGGAATG
ACTGGTTTAGTCCCTATATCGAATATGATTATCTCGGGAAACAGGGCTACCATGACGGCCAAAATAAAATCTCAGAATCA
CGGTATCGTATTGGCATGACGTTTACGCTATAA

Protein sequence :
MRTKTAFIMCCVLGIPAAGHALTFDVRGGYRAGSHSYESRYKVSQGWETGWWASMEMDNKNNKNNHQGNQGTDRADGSHS
FGDSTVDYNEIEANYSWPFADKWALQPGGIYHWSSKGTQLRPYLRVNYKATPDLTFGLRYRYDYNTYETVNSAGESHRDS
VNRLDLYVAYKFNAQWSALYQGTVYRHVNDDYKYKNDKSSATENALTLRYKWNDWFSPYIEYDYLGKQGYHDGQNKISES
RYRIGMTFTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECUMN_3381 YP_002414052.1 putative N-acetylneuraminic acid outer membrane channel protein nanC Not tested Not named Protein 2e-40 43