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Name : Alvin_1199 (Alvin_1199) Accession : YP_003443170.1 Strain : Allochromatium vinosum DSM 180 Genome accession: NC_013851 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 1384267 - 1386123 bp Length : 1857 bp Strand : - Note : TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: noc:Noc_2350 preprotein translocase subunit SecD DNA sequence : ATGAACCGATACCCCTTGTGGAAGAATCTACTCATCCTGGGCGTCATCCTGGTCGGCCTGCTGCTGGCCTGGCCGAACCT CTATTCCCAGGACCCATCGATCGAGATCACGGCCGCGCGCGGTCATGAGATCGGCGCGGCCAGTTCCGGCGAGATCAAGG CCGCGCTCGAGAACGCCAAGGTGCCGCTCAAGGGCATCGAGTCCCTGGAAGGCGGCAAGCTGCTCGCCCGTTTCGACACG CCCGGCGAACAGTTGCGCGGTCAGGAGGCCATCGAGCGCACCCTGTCCGAACGCTACCGCACCGCGCTCACCCAGTCGGC CGACCTGCCCGGCTGGATGCGCTGGCTGGGTCTCAATCAGATGTCGCTCGGTCTGGATCTGCGCGGCGGTATCCACGTCG TCATCGACGTCGACATGGAGGCCGCGATCGAACAGGCCGTCGAGCGCTACAGCGGCGATCTGCGCACCCTGCTGCGCGAG GACAAAATCCGCTATCTGACCCTGACCCGCGACGGCACCAACATCCTGATCCGCTTCGAGGATGCCGCCTCCCGCGAAGC CGGCGAAAAGAAGCTCAAGCGCGAGTTCCGCGAACTCGACTTCCAGCCGAGCGAAGAGTCCGGCGCCTTCGTGCTGCGCG CCGGCCTGCCCGAGACCGAGCAGCAGAAGATCAAGGACTTCGCGCTCCAGCAGAACATCACCACCCTGCGCAACCGCGTC AACGCGCTCGGCGTGGCCGAGCCGAGCATCGCCCGTCAGGGCGATCGGCGCATCGTCGTCGAGCTGCCGGGCGCACAGGA CCCGGGCCGGCTGAAGGATATCCTCGGCGCCACCGCCACGCTCGAATACCGTCTGGTCGACACCGAGGGCAGTGTCGCCG ACGCCGTCGCCGGACGCCCGCCCGTGGGCAGCAAGCTCTACTACGAACGCAACGGCACCCCGATCCTGCTCAAGCGCCGG GTGATCGTCACCGGCGACCAGATCACCGACGCCTCGGCCGGTTTCGACAGCCAGAGCGGCAGCCCGGCGGTGTTCGTCAA TCTCGACGGCCAGGGCGCGCGGCGCATGCGCGACGTGACCACCGAGAACGTCGGCAAGCCGATGGCCGTGGTCTTCATCG AGAACCGCACCACGACGCAGATGGTCGACGGCGAGCCGGTCAAGACCACGCGCAAGGTCGAGGAAGTCATCAGTGTCGCG ACCATCCGCGAGCCGTTCGGACGGCGCTTCCAGACCACCGGACTCGACAGCAGCAACGAGGCCCACGACACGGCGCTCCT GCTGCGCTCCGGCGCGCTCGCCGCCCCGATCGAGATCGTCGAGGAACGCACCATCGGCCCCAGTCTGGGTCAGGACAACA TCGATCAGGGTCTGGAATCGGTCATGCTCGGCCTGGGACTGGTCCTGCTGTTCATGGCCGTCTACTACCGGGTGTTCGGT CTGGTCGCGAATCTGGCCCTGGTGGTCAATCTGGTGCTGACCATCGCCGTGCTCTCGATGCTGCAAGCGACCCTCACCCT GCCCGGCATCGCCGGTATCGTGCTCACCATCGGCATGGCCGTGGATGCCAACGTGCTCATCTACGAGCGCATCCGCGAAG AGATCCGCAACGGCAACTCGCCCCAGGCCAGCATCCATGCCGGCTATGACAAGGCGTTCTCGACCATCGTCGACGCCAAC GTGACCACGCTGATCGCCGCCGTGGTGCTGTTCAGCTTCGGTACCGGACCGGTCAAGGGTTTCGCGGTGACGCTGTTCAT CGGTATCGTCACCTCCATGTTCACCGCCATCCTCGGCTCGCGCGCCCTGATCAATCTGATCTACGGCGGTCGGCGACTGA ACAAGCTGGCCATCTGA Protein sequence : MNRYPLWKNLLILGVILVGLLLAWPNLYSQDPSIEITAARGHEIGAASSGEIKAALENAKVPLKGIESLEGGKLLARFDT PGEQLRGQEAIERTLSERYRTALTQSADLPGWMRWLGLNQMSLGLDLRGGIHVVIDVDMEAAIEQAVERYSGDLRTLLRE DKIRYLTLTRDGTNILIRFEDAASREAGEKKLKREFRELDFQPSEESGAFVLRAGLPETEQQKIKDFALQQNITTLRNRV NALGVAEPSIARQGDRRIVVELPGAQDPGRLKDILGATATLEYRLVDTEGSVADAVAGRPPVGSKLYYERNGTPILLKRR VIVTGDQITDASAGFDSQSGSPAVFVNLDGQGARRMRDVTTENVGKPMAVVFIENRTTTQMVDGEPVKTTRKVEEVISVA TIREPFGRRFQTTGLDSSNEAHDTALLLRSGALAAPIEIVEERTIGPSLGQDNIDQGLESVMLGLGLVLLFMAVYYRVFG LVANLALVVNLVLTIAVLSMLQATLTLPGIAGIVLTIGMAVDANVLIYERIREEIRNGNSPQASIHAGYDKAFSTIVDAN VTTLIAAVVLFSFGTGPVKGFAVTLFIGIVTSMFTAILGSRALINLIYGGRRLNKLAI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 2e-111 | 47 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 5e-111 | 47 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 2e-111 | 47 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 2e-111 | 47 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 2e-111 | 47 |
