Gene Information

Name : Alvin_1401 (Alvin_1401)
Accession : YP_003443368.1
Strain : Allochromatium vinosum DSM 180
Genome accession: NC_013851
Putative virulence/resistance : Unknown
Product : cysteine desulfurase NifS
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1104
EC number : 2.8.1.7
Position : 1620286 - 1621506 bp
Length : 1221 bp
Strand : -
Note : KEGG: ttu:TERTU_1589 cysteine desulfurase NifS; TIGRFAM: cysteine desulfurase NifS; PFAM: aminotransferase class V

DNA sequence :
ATGACCGCCACCGCTCAAGGCATCTATTTCGACAACAACGCCACCACCATGGTCGCCCCTGAGGTGGTGGAGGCCATGCT
GCCCTATTTCACCGAGCAGTTCGGCAATCCGTCTTCGATCCATCAGTTCGGCAATCGGGTCGGACAGGCACTCAAACAGG
CGCGCGTCCAGGTCCAGACCCTGCTCGGCGCCGAGCACGACTCCGAGATCGTCTTCACCTCCTGCGGCACCGAGTCCGAT
TCGACCGCCATCCTCTCGGCGCTCAGGGTTCAGCCCGAGCGACGCGAGATCATCACGACGGTCGTCGAGCATCCGGCGGT
GCTGGCGCTCTGCGAGCAACTGGAGAAAGAAGGCTATACCGTCCACTACCTGCCGGTCGACGGTCGCGGGCGGCTCGATC
TCGACGCCTACGGACGACTGCTCTCCGAGCGCGTGGCCATCGTCTCGGTGATGTGGGCCAACAACGAGACCGGAACCCTG
TTTCCGGTCGAGCGCATGGCTGAGATGGCCAAGGCTGCCGGTGTTCTCTTTCATACCGATGCGGTGCAGGCCGTCGGCAA
GGTGCCGATCGATCTGAAACGGACCGCCATCGACATGCTGTCGCTCTCAGGCCACAAACTGCACGCACCCAAGGGCATCG
GCGTGCTCTATCTGCGGCGCAACACCCGGTTTCGTCCGCTGCTGCGCGGCGGTCATCAGGAGCGCGGACGGCGTGCCGGC
ACCGAGAACAGCGCCGCCATCGTCGCACTCGGCAAGGCGTGCGACATGGCGCTCGAATACATGGAACACGAGCAGACCAG
CGTGCGCGCTCTGCGCGACCGGCTCGAACAGGGCTTGATTGCGGCTGTGCCCCACTGCTTCGTCACCGGCGACACGGATA
ATCGGTTGCCGAACACCGCCAACATCGCTTTCGAATACATCGAAGGCGAGGCCATTCTTCTACTACTCAACAAGCTCGGC
ATCGCGGCTTCAAGCGGTTCGGCCTGCACCTCCGGCTCGCTCGAACCCTCGCACGTGATGCGTGCCATGGGCATCCCCTA
CACGGCCGCGCACGGCACCATCCGCTTCTCGCTCTCGCGCTACAACACCGCTGAGGAAGTCGAGCGCGTCATCGAAGCCG
TGCCGCCGATCGTGGCCCAACTGCGCAAACTCTCGCCCTACTGGGGCGTTGACGGCCCGGTCGAGGAGCCGGAAAAGGCG
TTTGCGCCCGCCTACGCCTGA

Protein sequence :
MTATAQGIYFDNNATTMVAPEVVEAMLPYFTEQFGNPSSIHQFGNRVGQALKQARVQVQTLLGAEHDSEIVFTSCGTESD
STAILSALRVQPERREIITTVVEHPAVLALCEQLEKEGYTVHYLPVDGRGRLDLDAYGRLLSERVAIVSVMWANNETGTL
FPVERMAEMAKAAGVLFHTDAVQAVGKVPIDLKRTAIDMLSLSGHKLHAPKGIGVLYLRRNTRFRPLLRGGHQERGRRAG
TENSAAIVALGKACDMALEYMEHEQTSVRALRDRLEQGLIAAVPHCFVTGDTDNRLPNTANIAFEYIEGEAILLLLNKLG
IAASSGSACTSGSLEPSHVMRAMGIPYTAAHGTIRFSLSRYNTAEEVERVIEAVPPIVAQLRKLSPYWGVDGPVEEPEKA
FAPAYA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96060.1 cysteine desulfurase Not tested T-PAI Protein 4e-54 41