Gene Information

Name : Alvin_R0033 (Alvin_R0033)
Accession : -
Strain : Allochromatium vinosum DSM 180
Genome accession: NC_013851
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2025534 - 2027048 bp
Length : 1515 bp
Strand : -
Note : RNAmmer 1.2, Lagesen et al., Nucleic Acids Res. Apr 22, 2007

DNA sequence : 
AGAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCATGCCTAACACATGCAAGTCGAACGCGAAAGGGCTTCGGCCTGA
GTAGAGTGGCGGACGGGTGAGTAACGCATGGGAATCTGCCTGGCAGAGGGGGATAACCCGGGGAAACTCGGGCTAATACC
GCATACGCCCTACGGGGGAAAGGGGGCTTCGGCTCTCGTTGCCAGATGAGCCCATGTCCGATTAGCTAGTTGGCGGGGTA
AAGGCCCACCAAGGCGACGATCGGTAGCTGGTCTGAGAGGATGACCAGCCACACTGGGACTGAGACACGGCCCAGACTCC
TACGGGAGGCAGCAGTGGGGAATATTGGACAATGGGGGAAACCCTGATCCAGCAATGCCGCGTGGGTGAAGACGGCCTGC
GGGTTGTAAAGCCCTTTCGGTGGGAAAGAAAAGCACGGGGCTAATACCTCCGTGTATTGACGTTACCCACAGAAGAAGCA
CCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATCACTGGGCGTAAAGCGCACGT
AGGCGGCACGGTCAGTCTGCTGTGAAAGCCCCGGGCTCAACCTGGGAACTGCAGTGGATACTGCCGCGCTAGAGTGTGAA
AGAGGGGGTGGAATTCCAGGTGTAGCGGTGAAATGCGTAGAGATCTGGAGGAACACCAGTGGCGAAGGCGGCCCCCTGGT
TCAACACTGACGCTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCTGTAAACGCTGTC
GACTAGCCGTTTGGTCCATTTAAGGGCTGAGTGGCGCAGCTAACGCGCTAAGTCGACCGCCTGGGGAGTACGGCCGCAAG
GTTAAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTT
ACCAGCCCTTGACATCCTCGGAACTTGGCAGAGATGCCTTGGTGCCTTCGGGAGCCGAGAGACAGGTGCTGCATGGCTGT
CGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGTAACGAGCGCAACCCTTGTCCCTAGTTGCCAGCACTTCGGGTG
GGAACTCTAGGGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTATGGGCTGGG
CTACACACGTGCTACAATGGTCGGTACAGAGCGTCGCGAAGCCGCGAGGTGGAGCCAATCGCACAAAACCGATCGTAGTC
CGGATCGCAGTCTGCAACTCGACTGCGTGAAGTCGGAATCGCTAGTAATCGCGGATCAGCATGCCGCGGTGAATACGTTC
CCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTTGGTTGCACCAGAAGTAGATAGCTTAACCTTCGGGAGGGCGT
TTACCACGGTGTGGTCAATGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCT

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-128 88.2
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-128 88.2
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-176 87.2
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-176 87.2
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-176 87.1
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-176 87.1