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Name : Alvin_1931 (Alvin_1931) Accession : YP_003443887.1 Strain : Allochromatium vinosum DSM 180 Genome accession: NC_013851 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit GlcD Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : 1.1.2.4 Position : 2205188 - 2206705 bp Length : 1518 bp Strand : + Note : KEGG: tgr:Tgr7_2037 FAD linked oxidase domain protein; TIGRFAM: glycolate oxidase, subunit GlcD; PFAM: FAD linked oxidase domain protein DNA sequence : ATGAGCCTGATCCAACCCACCCGAGTGGCCTTCGACGACCCGGATCTCAGGAACAAGCGCGCGGCACTGGTCGCCGAGCT GCGTACCTTCCTGCCGGACGATTCGGTGCTGGAGCGCGAGGAAGAAGTCCGCCCCTACGAGTGCGACGGACTCTCGGCCT ATCGTCAACTGCCGCTGCTGGTGGTGCTGCCGCGCACGGTCGCCGAAGTCCAGCGTATCCTGCGGCTCTGCCATGAACGC CGGGTCCCCGTAGTGGCACGCGGAGCCGGAACCGGACTCTCGGGCGGCGCCCTCCCCCTCCCCGATGGACTCCTGCTCAG TCTGGCGCGCTTCAACCGGATCCTGGAACTCGACCCGATCGGACGCACCGCCCGCGTCCAGCCCGGTGTGCGCAATCTCG CCATCAGCGAAGCGGTGTGTCCGCAGGGTCTCTACTATGCCCCGGACCCATCGAGCCAGATCGCCTGCACCATCGGCGGC AACGTGGCCGAGAACTCGGGCGGGGTGCACTGTCTCAAATACGGACTCACGGTCCACAACGTGCTGTCCGTCACCTTCGT CACACTGGAGGGCGAGCTGATCGAACTCGGCTCGGCGGCGCTCGACTCGGCCGGTTACGACCTGCTCGCGCTCTTCGTCG GCTCGGAGGGGATGCTCGGGGTCATGGTCGAGGCGCGGGTCAAGCTGCTACCGATCCCGGAGCGCGCCCAGGCGCTGCTG GCCGCCTTCGACGATGTGGAACGCGCCGGACGCGCCGTCGGCGACATCATCGCCGCCGGCATCATCCCGGCCGGACTGGA AATGATGGACGGCCCGGCGATCCAGGCCGCCGAGGACTTCGTTCACGCCGGCTATCCGACCGAGGCGGCGGCGATCCTGC TCTGCGAACTCGACGGCACCAACCAGGAGGTCTCCGAGCAGGTCATGCAGGTACGCAATCTCCTGCTCGACAGCGGCGCG ACCGAGGTTCGGACATCACAGAACGAAGCCGAGCGACTGCGCTTCTGGCAGGGGCGCAAAGCGGCCTTCCCCGCCGTCGG TCGCATCTCACCCGACTACTACTGCATGGACGGCACCATCCCGCGCCGCGCCCTGCCCGAGGTGTTGCGGCGCACCGCCG AGCTGTCCCAGGAATACGGACTGCGCGTGGCCAACGTCTTCCATGCCGGCGACGGCAATCTGCATCCGCTGATCCTGTTC GACGCCAACCAGCCCGGCGAACTGGAGCGCACCGAGGAACTGGGCGGACGCCTGCTGGAACTGTGCGTCGAGGTCGGCGG CACCATCACCGGCGAGCATGGCGTGGGCATCGAGAAGATCAATCAGATGTGCGTCCAGTTCACGCCCGAGGAACTGCGCC AGTTCCACGCCGTCAAGGCTGCCTTCGACCCGCTCGGCCTGCTCAATCCGGGCAAGGGCGTGCCGACCCCGAGACGCTGC TCGGAGTATCGGCTGAGTACTCCGGCCGCATCCGGTCAACCGTGCCAACATCATCCACGTCCGGCAGCGTTGTCCTGA Protein sequence : MSLIQPTRVAFDDPDLRNKRAALVAELRTFLPDDSVLEREEEVRPYECDGLSAYRQLPLLVVLPRTVAEVQRILRLCHER RVPVVARGAGTGLSGGALPLPDGLLLSLARFNRILELDPIGRTARVQPGVRNLAISEAVCPQGLYYAPDPSSQIACTIGG NVAENSGGVHCLKYGLTVHNVLSVTFVTLEGELIELGSAALDSAGYDLLALFVGSEGMLGVMVEARVKLLPIPERAQALL AAFDDVERAGRAVGDIIAAGIIPAGLEMMDGPAIQAAEDFVHAGYPTEAAAILLCELDGTNQEVSEQVMQVRNLLLDSGA TEVRTSQNEAERLRFWQGRKAAFPAVGRISPDYYCMDGTIPRRALPEVLRRTAELSQEYGLRVANVFHAGDGNLHPLILF DANQPGELERTEELGGRLLELCVEVGGTITGEHGVGIEKINQMCVQFTPEELRQFHAVKAAFDPLGLLNPGKGVPTPRRC SEYRLSTPAASGQPCQHHPRPAALS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 4e-135 | 70 |
