Gene Information

Name : Alvin_2743 (Alvin_2743)
Accession : YP_003444684.1
Strain : Allochromatium vinosum DSM 180
Genome accession: NC_013851
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 3105052 - 3105375 bp
Length : 324 bp
Strand : -
Note : PFAM: microcompartments protein; SMART: microcompartments protein; KEGG: pme:NATL1_06031 carboxysome shell protein CsoS1

DNA sequence : 
ATGCCTTCCGAAAACTATGGCATCGCGCTTGGAATGATCGAGACCCGCGGACTGGTGCCCGCCATCGAGGCGGCCGACGC
CATGACCAAGGCCGCCGAGGTGCGTCTGATCGGACGTGAGTTCGTCGGCGGCGGCTATGTGACCGTGCTGGTGCGCGGCG
AGACCGGCGCTGTGAATGCGGCGGTGCGCGCCGGAGCCGATGCCTGCGAGCGCGTCGGTGATGGTCTGGTCGCCGCGCAC
ATCATCGCCCGCCCGCATCGCGAGGTCGAGCCGATCCTGCCGGTCAAGCCGGGCGACACCGACGGCGGGCATGGTCGCTC
CTGA

Protein sequence : 
MPSENYGIALGMIETRGLVPAIEAADAMTKAAEVRLIGREFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAH
IIARPHREVEPILPVKPGDTDGGHGRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 9e-12 60
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 7e-12 55
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 4e-11 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Alvin_2743 YP_003444684.1 microcompartments protein VFG1596 Protein 4e-12 60
Alvin_2743 YP_003444684.1 microcompartments protein VFG1597 Protein 3e-12 55
Alvin_2743 YP_003444684.1 microcompartments protein VFG1598 Protein 2e-11 51