Gene Information

Name : Alvin_0386 (Alvin_0386)
Accession : YP_003442377.1
Strain : Allochromatium vinosum DSM 180
Genome accession: NC_013851
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : -
Position : 448881 - 449324 bp
Length : 444 bp
Strand : +
Note : PFAM: ribonuclease H; KEGG: cja:CJA_2049 RNase H

DNA sequence :
ATGTCTGACTGTGTCGAAGCCTTCACCGACGGCGCCTGCAAGGGCAACCCCGGCCCAGGCGGCTGGGGCGTGCTGCTGCG
CTGGGGCGAGGTCGAGAAGGAACTGCACGGCGGTGAGCGCGAGACCACCAACAACCGCATGGAGCTGATGGCCGTGATCA
TGGCGCTCGAAGCGCTCAAGCGCCCGACCCCGATCCGGATCACCACCGACTCGCAATACGTCAAGCGCGGAGTGGGCGAA
TGGATGCCGCGCTGGAAGCGCAACGGCTGGCGCACCGCCGATCGTCAGCCGGTCAAGAACCGCGATCTCTGGGAGCGTCT
GGACCGGGCGCTCGGCCAGCACGAGGTGAGCTGGCGCTGGGTCAAGGGCCACGCCGGGCACGCCGAGAACGAGCGCGCCG
ACTGGCTCGCCAATCTGGGCGTTCCAACCACAGGAGGACGCTGA

Protein sequence :
MSDCVEAFTDGACKGNPGPGGWGVLLRWGEVEKELHGGERETTNNRMELMAVIMALEALKRPTPIRITTDSQYVKRGVGE
WMPRWKRNGWRTADRQPVKNRDLWERLDRALGQHEVSWRWVKGHAGHAENERADWLANLGVPTTGGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 5e-37 61