Gene Information

Name : Alvin_0862 (Alvin_0862)
Accession : YP_003442840.1
Strain : Allochromatium vinosum DSM 180
Genome accession: NC_013851
Putative virulence/resistance : Unknown
Product : TrmH family RNA methyltransferase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0565
EC number : -
Position : 1005454 - 1006236 bp
Length : 783 bp
Strand : +
Note : TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: psp:PSPPH_1306 RNA methyltransferase

DNA sequence :
ATGATAGACCAAATGACCGAGTCGCTGGCGCGAATCCGTTTCGTGCTGGTCGAGACGACACACAGCGGCAACATCGGCGC
GGTGGCACGCGCCATGAAGACCATGGGGCTGTCGCGCCTGGATCTGGTCGCCCCGCGCCAGCGGCCCGACGCCGAAGCCC
TGGCGCGTGCCTCCGGGGCCGATGATCTGCTCGCGCGCGCCGGGGTCCACGAGAATCTGACCGACGCCCTGGCCGGCTGT
CGGCTGGTGGTCGGCGCCAGCGCGCGGCTGCGCTCGATCGAGTGGCCGCTGCTGGAACCGCCCGAGTGCGCGGAGCGTCT
GCTCGCCGAGGCCGGTGAGGGCGAGGTGGCCCTGATGCTGGGACGCGAGAGTTCCGGCCTGACCAACGACGAGCTGGCGC
GCTGTCACTTCCTGGTCCATATTCCGACCAATCCCGACTTCAGCTCGCTCAACGTCGCCGCCGCCGCCCAGGTGCTCGCC
TACGAGATCCGCCGTGCGGCCCGTGCAGTAGCCGGCGAGCGGTTGACCGAGACCCCGCGCGATCTGGCCACCGCCGAGGC
GATGGAAGGCTTCTACGCCCATCTGACCGAGACCCTGGTCCGGATCGGCTTCAGCGATCCCGAGCAGTCGCGCACGCTCA
CCCGCCGCCTGCGCCGTCTCTTCAACCGCGCCCAGCCGGATCGGGTCGAACTCAACATCCTGCGCGGCATCCTCAGCGCC
GCCCAGGGGCGCAAGACGCCCGAACGCTTCGCGCGCCCGGACGAGGCGCCGCAACCGGATTGA

Protein sequence :
MIDQMTESLARIRFVLVETTHSGNIGAVARAMKTMGLSRLDLVAPRQRPDAEALARASGADDLLARAGVHENLTDALAGC
RLVVGASARLRSIEWPLLEPPECAERLLAEAGEGEVALMLGRESSGLTNDELARCHFLVHIPTNPDFSSLNVAAAAQVLA
YEIRRAARAVAGERLTETPRDLATAEAMEGFYAHLTETLVRIGFSDPEQSRTLTRRLRRLFNRAQPDRVELNILRGILSA
AQGRKTPERFARPDEAPQPD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96063.1 group 1 trmH family protein Not tested T-PAI Protein 8e-51 53