Gene Information

Name : smi_1076 (smi_1076)
Accession : YP_003446188.1
Strain : Streptococcus mitis B6
Genome accession: NC_013853
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1059000 - 1059758 bp
Length : 759 bp
Strand : -
Note : COG1136, ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGACACTTTTAGATGTAAAACACGTTCAAAAAATTTATAAAACTCGTTTTCAGGGCAACCAAGTAGAGGCCCTCAAGGA
TATTCACTTTACCGTTGAAAAAGGTGACTACGTTGCCATCATGGGTGAGTCTGGTTCTGGTAAATCAACTCTTCTCAATA
TTCTAGCTATGCTGGATAAACCAACTCGTGGTCAGGTTTACTTGAATGGAACTGACACAGCAACCATTAAAAATTCACAG
GCTTCTAGCTTCCGTCGTGAAAAATTGGGCTTTGTCTTCCAAGACTTTAACTTGCTAGATACTCTGTCTGTTAAGGACAA
TATCTTGCTTCCCCTTGTCTTGTCAAGAAGACCCATTACGGAGATGATGAAGAAATTGGTGGTGACAGCTGAGAATCTAG
GCATCAACCAATTGCAAGAGAAGTACCCTTACGAGATTTCTGGTGGTCAGAAACAGCGTGTGGCAGTAGCTCGTGCCATC
ATCACAGAACCTGAAATTCTCCTTGCGGACGAGCCAACAGGAGCCCTTGATTCCAAGTCCTCTGCAGCCTTACTTGATGT
CTTTGATGAAATCAATGAGCGTGGCCAAACTATTCTTATGGTAACCCACTCAACGGCAGCAGCTAGCAGGGCCAAACGTG
TACTCTTTATCAAAGACGGCATTCTTTACAATCAAATCTACCGTGGAGAGAAGACAGAGCGTCAGATGTTCCAAGAAATC
TCTGATACCTTGACTGTCATGGCAAGCGAGGTGAATTAG

Protein sequence : 
MTLLDVKHVQKIYKTRFQGNQVEALKDIHFTVEKGDYVAIMGESGSGKSTLLNILAMLDKPTRGQVYLNGTDTATIKNSQ
ASSFRREKLGFVFQDFNLLDTLSVKDNILLPLVLSRRPITEMMKKLVVTAENLGINQLQEKYPYEISGGQKQRVAVARAI
ITEPEILLADEPTGALDSKSSAALLDVFDEINERGQTILMVTHSTAAASRAKRVLFIKDGILYNQIYRGEKTERQMFQEI
SDTLTVMASEVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
smi_1076 YP_003446188.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 7e-42 45
smi_1076 YP_003446188.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-39 43
smi_1076 YP_003446188.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 7e-35 41
smi_1076 YP_003446188.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-38 41