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Name : clpB (AZL_c04990) Accession : YP_003452336.1 Strain : Genome accession: NC_013857 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 631624 - 634308 bp Length : 2685 bp Strand : - Note : - DNA sequence : ATGGACTTCGGTCAATTCACCGATCGCGCCCGCGGCGTGATCCAGGCGGCCCAGATCGCCGCCCTTGCCGAGCGGCATCA ACAGCTTCTTCCCGAACATCTGCTGAAGGCCCTGATCGACGACACCGGCGGCGTCACCGCCCGTCTGGTGCGTGATACCG GCGGCGATCCCGATCTGCTGAAATCCGCGACCGAGGAACAGCTCGCCCGCGCTCCGGTCCAGGCCGGGGCCGGCGAAGGC CCGCAGCCGCTCTACATGTCGCCGGCGTTGGCCGCCGTGCTCCAGGGCGCCGTCGCCTCGGCCCGCACCGGCGGCGACCG CTTCGTCACCGCCGAACGGCTGCTGGAGAGCCTCGCCCGCCAGAGCGGCCCGCTGCGCGCCCTGTTCCGCCGGGCCGGTG TCGATGCCGACGCGCTGGCCGCCGCCGCCGACGCCCAGCGCAAGGACCATCCCGCCGATGCCGAGACCGAGACGACGTCC GGCGAGGCGCTGGCCCGCTACACCCGTGACCTGACGGAAGAGGCGCGGCAGGGCCGGCTCGATCCCGTCATCGGCCGTGA CGACGAGATCCGCCGCACCATCCAGGTGCTGGCCCGCCGCACCAAGAACAATCCCGTGCTGATCGGCGAGCCCGGCGTCG GCAAGACCGCCGTGGTCGAGGGGCTGGCCCAGCGTCTGGCCGCCGGCGATGTTCCGGAAGGCTTGAAGGACCGCCGCGTC CTGGCGCTCGACCTCACCGCCCTGCTGGCCGGCGCCAAGTTCCGCGGCGAGTTCGAGGAGCGGCTGAAGTCGGTGCTGTC CGAGGTGGCGGAGGCCAACGGCCGCATCATCCTGTTCATCGACGAGCTGCACACGCTGATCGGCGCCGGCCGCACCGACG GGGCGATGGACGCCGCCAATATGCTGAAGCCCGCGCTGGCGCGCGGCGAACTGCGTTGCGTCGGCGCCACCACGCCGGAC GAGTACCGCAAATACATCGAGAAGGATGCGGCGCTGGCCCGCCGCTTCCAGCCGGTGACGGTGGACGAGCCGTCGGCCGA CGACGCCGTGTCGATCCTGCGCGGGATCAAGAGCAAGTATGAGGTCCATCACGGCGTGCGCATCGCCGACGCCGCGGTCG TCGCGGCGGTGACCCTGTCGGCCCGCTACATCGGCGACCGCCGGCTGCCCGACAAGGCGATCGATCTGGTCGACGAGGCG GCGAGCCGCCTGCGCATGGCCATCGACAGCAAGCCGGAGGCGCTGGATGCCGTCGACCGCCGCGTCGCCCAGTTGAAGAT CGAGCGCGAGGCGCTGAAGGCCGAGCCGGACGCCGCCTCGCAGGAGCGCCTGCACGCCCTTGAGGGCGAGTTGACCGAGG CGGAAGCCCGCCAGTCCTCGATGGAGGAGGAGTGGCGCGCCTCGCAATCCCGCCGCACCGAGGGGCGCCGCCTGAAGGAG GAGCTGGACCAGGCTCGGACGAAGCTGGAGCGCGCCCAGCGCGACGGCGACTGGGCCAAGGCCGGCGAGTTGGCCTATGG CGTGGTGCCCGATCTGGAGAAGCGGCTGGCCGACGCCGAATCGCGCGCCAGCACCGAGCGGGACGAGGTGACGGCCAAGG ATATCGGCGCCGTCGTCACCCGCTGGACCGGCATCCCGGTGGAGCGGATGCTGGAGGGCGAACGCCAGCGGCTGAAGGGC ATGGAGGACAAGCTGGCCGAGCGCGTGGTCGGCCAGAAGGAGGCGGTGCGCGCGGTGTCCAAGGCGGTGCGGCGCGCCCG CGCCGGGCTGAAGGATCCCAGCCGCCCGACCGGCTCCTTCCTGTTCCTGGGGCCGACCGGCGTCGGCAAGACCGAGCTGG CCAAGGCGCTGGCCGCCTTCCTGTTCGACGACGAGACGGCGATCACCCGGCTCGACATGTCGGAATATATGGAGAAGCAT GCGGTCAGCCGGATGATCGGCTCGCCTCCGGGCTATGTCGGCTATGACGATGGCGGATCGCTGGCGGAGCGCATCCGGCG CCGGCCCTATCAGGTCGTGCTGCTGGACGAGGTGGAGAAGGCGCATCCCGACGTGCTGAACGTGCTGCTTCAGGCGCTCG ACGACGGGCGGCTGACCGACGGGCAGGGCCGCACCGCCGACTTCCGCCACGCCATCCTCATCATGACCTCCAACCTGGGG GCCGAGGCGTTGAGCGCCCTGGGCGATGACGAGGACATGGCCGGCGTGACGGTCGAGGTGATGGACGCGGTGCGCAAGGC CTTCCGGCCGGAGTTCCTGAACCGGCTGGACGATGTCCTGATCTTCCGCCGGCTGGGCCGCGACCAGATGGCGCGCATCG TCGATATCCAGCTCGCCCGCGTCAATGAGCGGCTGGCCGAGCGGGGCGTCATCCTGGCGGCGGACGAGGCGGCCAAGCGG CGGCTGGGCGATCTGGGCTGGGATCCGGCCTTCGGCGCCCGTCCGTTGAAGCGGGCCATCCAAGGCCTTGTCGAGGACCC GATCGCCGAGCGCCTGCTCGACGAGGAGGTCGAAGGCAGGACGACCATGGCCCTGTCGGTGGTCGACGGCCGGCTGGCGC TGGACGGCGTGGTGGTCGAGGAGGAGCGCGCCCACGGTTTCAAGGCGCCGGAACGCCCGCCGCTCGGCTTCGCCCTGCCG CCGGTGGCCGCCGCCGCCGCGGCGCGGGAGGCGTCGGTCCACTGA Protein sequence : MDFGQFTDRARGVIQAAQIAALAERHQQLLPEHLLKALIDDTGGVTARLVRDTGGDPDLLKSATEEQLARAPVQAGAGEG PQPLYMSPALAAVLQGAVASARTGGDRFVTAERLLESLARQSGPLRALFRRAGVDADALAAAADAQRKDHPADAETETTS GEALARYTRDLTEEARQGRLDPVIGRDDEIRRTIQVLARRTKNNPVLIGEPGVGKTAVVEGLAQRLAAGDVPEGLKDRRV LALDLTALLAGAKFRGEFEERLKSVLSEVAEANGRIILFIDELHTLIGAGRTDGAMDAANMLKPALARGELRCVGATTPD EYRKYIEKDAALARRFQPVTVDEPSADDAVSILRGIKSKYEVHHGVRIADAAVVAAVTLSARYIGDRRLPDKAIDLVDEA ASRLRMAIDSKPEALDAVDRRVAQLKIEREALKAEPDAASQERLHALEGELTEAEARQSSMEEEWRASQSRRTEGRRLKE ELDQARTKLERAQRDGDWAKAGELAYGVVPDLEKRLADAESRASTERDEVTAKDIGAVVTRWTGIPVERMLEGERQRLKG MEDKLAERVVGQKEAVRAVSKAVRRARAGLKDPSRPTGSFLFLGPTGVGKTELAKALAAFLFDDETAITRLDMSEYMEKH AVSRMIGSPPGYVGYDDGGSLAERIRRRPYQVVLLDEVEKAHPDVLNVLLQALDDGRLTDGQGRTADFRHAILIMTSNLG AEALSALGDDEDMAGVTVEVMDAVRKAFRPEFLNRLDDVLIFRRLGRDQMARIVDIQLARVNERLAERGVILAADEAAKR RLGDLGWDPAFGARPLKRAIQGLVEDPIAERLLDEEVEGRTTMALSVVDGRLALDGVVVEEERAHGFKAPERPPLGFALP PVAAAAAAREASVH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 3e-139 | 48 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-92 | 43 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 3e-96 | 42 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 3e-96 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_003452336.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0079 | Protein | 8e-157 | 44 |
| clpB | YP_003452336.1 | ATP-dependent Clp protease ATP-binding subunit | VFG2076 | Protein | 1e-107 | 44 |
| clpB | YP_003452336.1 | ATP-dependent Clp protease ATP-binding subunit | VFG2084 | Protein | 6e-102 | 41 |
