|
Name : secD (LLO_0932) Accession : YP_003454416.1 Strain : Legionella longbeachae NSW150 Genome accession: NC_013861 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 1070698 - 1072554 bp Length : 1857 bp Strand : + Note : equals llo0932; similar to protein-export membrane protein SecD DNA sequence : ATGCAAAATAAATATCCTTTATGGAAAAACCTGATGCTGATTGTCATAGCAGTTGTTGGGTTAGTTTACGCCATACCTAA TTTGTATACAGAAAATCCTGTAGTACAAATATCATCTGAAACACCAGTAGATTATGATGAATTAAAAAATCAGGTAGAAA ATATCTTAAATAAGGATAAGCTGCACTATACATCCCTTGTTGTTCAAAACGAAGGTGTGGAAGTGGTTTTTTCATCTACT GATGCTCAATTATTAGCTCGCGACACTATAAAAAATGCTTTAGGATCTCAGTACACAGTGGCTTTAAATTTAGCACCTTC TACCCCAGGCTGGTTAGATGCCATTCATGCTGCGCCAATGAAGCAAGGTCTGGACCTTAGAGGTGGAGTGCACTTTTTAT TAGAAGTTGATGTAGAAAGTGTGATTAGTCGCCGCTATGAAGGAATCATGAAAAATATCAGTCAGGAGTTACGTGAGCTT GGTATTCGTTACACCGGCATACGTTTTATACCTGATAAAGGTGTTGAGCTACGTTTCCGTGATCCTCAATCTATGGATAA TGCTTTTATAGGTTTAAAAGAAAAAATACCTGATCTTATTTTTGTAAAAAGTAAAGCAAATAATGGAATTATGGCATCAG TTTCTCCTACTGAGTTAAATACCATGCGACAAAATACCATTGAACAAACTATGAGTATTTTGCGTAATCGAGTGAATGAA CTAGGAGTTGGTGAGGCGGTAGTACAACAACAAGGGGCGACTCGAGTTGCTGTGGATTTACCAGGAATACAGGATGCGGC ACGTGCCAAGCAAATTCTGGGCGGTACTGCTACCCTACAATTTTATTTGGTAGATCAGGATAATGACCCACAAATTGCTA AACAAACGGGTGTTGTCCCTGTCAATGATAAATTGTTGATGATGGATGGATATCCTATCTTACTAAAGAGACAAGTAGTC CTTAGTGGTGATTCAATCACTTCCGCAGTTTCTAGCTATGATCAGCAAACGGCAACTCCAGCAGTACAAATACAACTTGG TGGGGGCGGTGAAAGTTTGTTTACTAAAGTTACTCGCGAAAATATTGGTAAACGTATGGCCATTGTGTATGTTGAAACTA AAAATAACATACAAACCGTAAATGGGGTTGAAAAGAGAATTACCCATCGTGAAGAGCGTGTTATTAGCGCCCCTGTGATT CAAAATGCTTTAGGCAATAATTTCCAAATTACCGGGCTTACTGATTCTAAAGAAGCAAGCAATTTGGCTTTATTGTTAAG GGCAGGAGCGTTACCAGCAGCAATTTATCCGATAGAAGAGCGTACCGTAGGACCAACTTTAGGAAAAGAAAATATCCGCA GAGGCATCATTTCCCTCGAAGTAGGTATGGGCTTAATTCTAATTTTAATGCTGAGCTATTACCGTTTTTTTGGGCTTATA GCAGATGTTGCTCTATTACTTAATCTGGTTTTGCTAAGTGCCTTGTTATCTGTAATTGATGCAACCCTTACGCTTCCAGG TATTGCTGGAATTGTATTGACGGTAGGTATGGCTGTAGATGCGAATGTGCTGATTTATGAACGTATCCGAGAGGAGTTAC GACATGGCTTGTCACCTCAAGCAGCAATTTATGCTGGATATGAGCGTGCTTTTTCAACCATTCTTGATGCGAACATAACT ACCCTGATTGTGGCAATCATTCTTTTTGCAGTGGGTACTGGGCCTGTGCGTGGATTTGCAGTAACTCTTTCATTAGGATT ATTAACCTCCATGCTCACCGGTATTACTTATACCCGTGCAATTGTAAATTGGTATTATGGTGGCAGAACCGTAAAAAAAC TATCTATAGGTATTTGA Protein sequence : MQNKYPLWKNLMLIVIAVVGLVYAIPNLYTENPVVQISSETPVDYDELKNQVENILNKDKLHYTSLVVQNEGVEVVFSST DAQLLARDTIKNALGSQYTVALNLAPSTPGWLDAIHAAPMKQGLDLRGGVHFLLEVDVESVISRRYEGIMKNISQELREL GIRYTGIRFIPDKGVELRFRDPQSMDNAFIGLKEKIPDLIFVKSKANNGIMASVSPTELNTMRQNTIEQTMSILRNRVNE LGVGEAVVQQQGATRVAVDLPGIQDAARAKQILGGTATLQFYLVDQDNDPQIAKQTGVVPVNDKLLMMDGYPILLKRQVV LSGDSITSAVSSYDQQTATPAVQIQLGGGGESLFTKVTRENIGKRMAIVYVETKNNIQTVNGVEKRITHREERVISAPVI QNALGNNFQITGLTDSKEASNLALLLRAGALPAAIYPIEERTVGPTLGKENIRRGIISLEVGMGLILILMLSYYRFFGLI ADVALLLNLVLLSALLSVIDATLTLPGIAGIVLTVGMAVDANVLIYERIREELRHGLSPQAAIYAGYERAFSTILDANIT TLIVAIILFAVGTGPVRGFAVTLSLGLLTSMLTGITYTRAIVNWYYGGRTVKKLSIGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 4e-99 | 45 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 3e-99 | 45 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 3e-99 | 45 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 3e-99 | 45 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 2e-99 | 45 |
