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Name : TK90_1303 (TK90_1303) Accession : YP_003460547.1 Strain : Thioalkalivibrio sp. K90mix Genome accession: NC_013889 Putative virulence/resistance : Unknown Product : protein exporter SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 1380374 - 1382242 bp Length : 1869 bp Strand : - Note : TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: noc:Noc_2350 preprotein translocase subunit SecD DNA sequence : ATGCGCAATTCCTATCCGGCGTGGCTGTACGCCCTGATTGTCGTCGTCATCCTGGGTGCGGGGCTGTATGCCGCGCCCAA CCTGTTCCCGGAGGACCCGTCGGTCCAGATCGGGAATCCGACCACCGGCGAGATTGATCAGAACATCCGTGAGCTGATGG GCACCATCCTGGGTGCCCAGGGCGTCACGCCGCATACGGTCGAGGAGCAGGACGACGGCCAGATCCTGCTGCGCTTCGAG ACCACGGACGAGCAGTCCACCGCGGCGGAGATATTGCGCAACGCGCTGGATGATAATCACACCGTAGCCCTGAACATGGC CCCGGCCACCCCGCGGTGGTTGCGAGCCATCAATGGCCAGCCCATGGCCCTCGGCCTCGACCTGCGTGGGGGGGTTCACT TTCTGATGGAAGTGGACCTGGACGCCGTGATTGGCACCGCGATGGAACGCTACTCGAATGAGTTGCGCGGGCGCCTGCGT GAAGAACGTATTTCGTTCGACACCGTGGAACGCGGCTCCCGCGATCTGACCGTGATGTTCGAGAGCGAGGCGGATCGCGA AGCGGCCGAGGGCTGGCTGCAGCGCCAGTATCGCGAGGAACTGGTCTGGGAATCGCGTGGGTCCGGTGACACCAGCCGAC TGGTAGCCACACTGGATGACGACCATCTGACTGAACTGCGCCGTCAGGCGCTGCAGCAAAACATCTCCACGCTGCGCTCT CGGGTCGACGAGCTGGGCGTGGCGGAGCCGATCATCGCCCAGCAGGGCGAGAACCGGATCGTAGTGCAGCTCCCGGGCGT GCAGGACACGGCACGGGCGAAGGAGGTCCTGGGCGCGACCGCGACGCTGGAATTCCGCCTCGTGTCCGAGAGTGGCGATG CTCAGGAGGCCGACGAAACCGGGCGTGCACCCTCGGGTACACGGCTTTATTACGAACGCGACGGGACACCGGTGCTGCTG CAGCGCCAGGTCATGCTGACGGGGGACTACATCACGGATGCCTCCTCGGGCATTGCCCAGGATACGGGCGGTCCGGCGGT GTTCATCAATCTGGACGGCCAGGGCGCGCGGATCTTCTCGCGCGTGACGTCGGACAACGTCGGCCGGCTGATGGCGACCG TGTTCATCGAGACCTCGACCGAGACGGTAGAGGAAGACGGCGAGCAGGTGATGCGTACCTCCCGTAGCGAAGAGGTCATC AACGTCGCGCGCATCAACGAGCCCCTGGGGCGTCGCTTCCAGATCTCCGGCCTCGACAGCAGCCGCGAGGCTCGCAATCT GGCGCTGCTGCTGCGCGCCGGCGCGCTCGCCGCACCGATGTCGATCGTGGAAGAACGTACGGTGGGCCCGAGCCTGGGTC AGGAAAACATCGATCGCGGTATGCAGTCGGTGGTCATCGGCTTCATTGCCGTGATGATCTTCATGGTGTTGTACTACCGG GTGTTCGGAGTCATCGCGAACGTTGCGCTTGCGTTGAATCTGATCTTCATTGTCTCGGTGTTGTCGATGCTGCAGGCGAC ACTCACCTTGCCGGGCATCGCGGGTATCGTGCTGACCGTGGGTATGGCGGTGGACGCCAACGTTCTGATTTTAGAGCGAA TACGCGAGGAGTTACGGAACGGACTGTCACCACAGGCCGCGATCGCCTCGGGCTATGACCGCGCGTTCACTACGATTGCG GATGCCAACGTGACCACGCTGATCGCGGCGCTCGTACTGTTCCTGTTCGGCACCGGCCCGATCAAGGGATTCGCGATCAC GCTGTCGATCGGGATCATCGCCTCGATGTTCACGGCGATCATGGTGACCCGCGCCATCGTCAACCTCACCTACGGGCGGC AGCGTCGGCTGAACCGTCTGGCTATCTGA Protein sequence : MRNSYPAWLYALIVVVILGAGLYAAPNLFPEDPSVQIGNPTTGEIDQNIRELMGTILGAQGVTPHTVEEQDDGQILLRFE TTDEQSTAAEILRNALDDNHTVALNMAPATPRWLRAINGQPMALGLDLRGGVHFLMEVDLDAVIGTAMERYSNELRGRLR EERISFDTVERGSRDLTVMFESEADREAAEGWLQRQYREELVWESRGSGDTSRLVATLDDDHLTELRRQALQQNISTLRS RVDELGVAEPIIAQQGENRIVVQLPGVQDTARAKEVLGATATLEFRLVSESGDAQEADETGRAPSGTRLYYERDGTPVLL QRQVMLTGDYITDASSGIAQDTGGPAVFINLDGQGARIFSRVTSDNVGRLMATVFIETSTETVEEDGEQVMRTSRSEEVI NVARINEPLGRRFQISGLDSSREARNLALLLRAGALAAPMSIVEERTVGPSLGQENIDRGMQSVVIGFIAVMIFMVLYYR VFGVIANVALALNLIFIVSVLSMLQATLTLPGIAGIVLTVGMAVDANVLILERIREELRNGLSPQAAIASGYDRAFTTIA DANVTTLIAALVLFLFGTGPIKGFAITLSIGIIASMFTAIMVTRAIVNLTYGRQRRLNRLAI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 2e-116 | 45 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 2e-116 | 45 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 2e-116 | 45 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 5e-116 | 45 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 3e-116 | 45 |
