Gene Information

Name : TK90_1689 (TK90_1689)
Accession : YP_003460920.1
Strain : Thioalkalivibrio sp. K90mix
Genome accession: NC_013889
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1807677 - 1808405 bp
Length : 729 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dsh:Dshi_2678 ABC transporter

DNA sequence : 
ATGCAGGATCAGACGATGCATCCCCAGCGACCGCTCGGCAGCCCGGTGCTCGCCATGAGTGGAGTGGCCTTCGGCTACCC
CGGCGAGGGTCGCGTGCTGCATGACGTGGAGCTGGCGCTGGCACCCGGCGAGCGCGTGGCGATCGTCGGCGAGAGTGGCA
CCGGCAAATCCACGCTGTTGCACCTGGCGGCCGGGCTGGAGCCGGCCGACACCGGCACGGTGGAACTGGCCGGTCAGGCG
CTGGCGGGGCTGGACGAGGCGGCGCGTACGCGGCTGCGCCGAGCGCAGGTTGGGATCGTGTTTCAGTCGTTTCATCTGAT
CCCGACGCTCACGGCGCTGGAGAACGTGATGCTGCCGCTGGAGCTGGCGACGGATCTGGATGCCGCTCAGCGCCGTGAGC
GGGCTGCGGCGCAGCTGGCAGCCGTGGGGCTCGCGGACAAGGGCGGGCGCGAACCGGAGCAGCTATCCGGCGGCGAGCAG
CAGCGCGTGGCGATCGCACGGGCGCTGGTGCACCGGCCGGCGCTGATCCTGGCCGACGAGCCGACCGGCAACCTCGACTC
GCGCACCGGCGAGGCGGTGTTCGGCCTGCTGCTGGAACAGGTGCGCGCGACCGGCTGCGCGCTGTTGCTGGTTACGCATA
GCGATGACCTGGCCGGGCGTCTGGACCGGGTGCTGCGCATGCAGGACGGCCACCTGCAGGATCTCGCCGCGGAAGCCTCG
GCGACGTGA

Protein sequence : 
MQDQTMHPQRPLGSPVLAMSGVAFGYPGEGRVLHDVELALAPGERVAIVGESGTGKSTLLHLAAGLEPADTGTVELAGQA
LAGLDEAARTRLRRAQVGIVFQSFHLIPTLTALENVMLPLELATDLDAAQRRERAAAQLAAVGLADKGGREPEQLSGGEQ
QRVAIARALVHRPALILADEPTGNLDSRTGEAVFGLLLEQVRATGCALLLVTHSDDLAGRLDRVLRMQDGHLQDLAAEAS
AT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TK90_1689 YP_003460920.1 ABC transporter NC_008702.1.4606598. Protein 1e-30 46
TK90_1689 YP_003460920.1 ABC transporter NC_012469.1.7686878. Protein 6e-29 43
TK90_1689 YP_003460920.1 ABC transporter NC_012469.1.7685735. Protein 2e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TK90_1689 YP_003460920.1 ABC transporter VFG2059 Protein 8e-10 42