Gene Information

Name : TK90_1894 (TK90_1894)
Accession : YP_003461121.1
Strain : Thioalkalivibrio sp. K90mix
Genome accession: NC_013889
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0247
EC number : -
Position : 2010332 - 2011597 bp
Length : 1266 bp
Strand : +
Note : PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: pag:PLES_57481 glycolate oxidase iron-sulfur subunit

DNA sequence :
ATGGAGACCCGGCTGCACGAACGCTTCGCGAACGATCCGGCCGCGCGCATTGCGGAGGATGCGCTGCGCGCCTGCGTGCA
CTGCGGCTTCTGCAACGCGACCTGCCCGACCTACCAGGAGCTGGGCGACGAGGTCGACGGCCCGCGCGGGCGCATCTACC
AGATCAAGGAAATCCTCGAATCCGGCGAGGCCAACCCCACCGCGCGCACCCACCTGGACCGCTGCCTGACCTGCCTCAAC
TGCATGACCACCTGCCCCTCGGGCGTGGACTACAACCACCTGGTCGCCTATGGCCGGGAGGTGATCGAGCAGGACCTCGA
TCGCAACTGGCGCGAGCGGACCCTGCGCGGCCTGCTGGCCCGCACCCTGCCCGCGCGCTGGCCGTTCCGCCTGGCCCTGG
GGCTGGGGCGCATGGTGCGCCCCGTCCTGCCCGCGACCCTGCGCCGCCGGGTACCCGCGCGGCAGGAAGCCCACGAAGCG
ACACAACCGATCCCTTCGCCAATCCTGGAAGGCTTTCCCCACGGGCGTGTCCTGCTGCTAAGCGGTTGCGTCCATGATGC
AATCGACGCGCGCACCAACGCCGCACTGAAGAACCTCCTGGGGCGCCTCGGCGTCGAGGTCGTGGAAGCCGGCGAGGCTC
GGTGCTGCGGGGCCGTCGAGCACCACCTGGCTTTCGAGGAACGCGCCCGGCAACGGGTGCGCGCCAACCTCGACGCCTGG
CAACCCGCGCTCGACCAGGGCGTGGACGCGGTGGTCAGCACCGCCAGCGGCTGCGGCGTGATGCTGCGCGACTACGGCCA
CCTGCTGGCTGGCGATTCGGACTACGCGGAACGCGCACGCGGCGTCTCCGAGCGCGTACGCGACCCGGTGGAATTGTTCA
GCCCGGACGCTATCCAGAAGCTGGGCATTCGCGCCCCGCAGGGCCACGACCCGATCGCCTGGCACGCCCCCTGCACCCTG
CAGCATGGCCAGCGCCTGGCCGGGCGCGTAGAACCGCTTCTGCAGGCGGCAGGCTTCGAACTGGCACCCACAGCCGAGCC
TCACCTATGCTGCGGCTCGGCAGGGACCTACTCGATCACCCAGCCAGCGATGGCCGCCCGTCTGCGTACCCGCAAGCTGG
ACAATCTGGAGGCCGCCGCACCCGCGCGTATCATAACGGCCAACGTCGGTTGCCAGACGCATCTCCAGTCCGGGACCGAG
ACGCCGGTCGAGCACTGGCTGACGCTGCTCGAGCGCCATTGTCCGGCAACTCCCGCCGGTGCGTAG

Protein sequence :
METRLHERFANDPAARIAEDALRACVHCGFCNATCPTYQELGDEVDGPRGRIYQIKEILESGEANPTARTHLDRCLTCLN
CMTTCPSGVDYNHLVAYGREVIEQDLDRNWRERTLRGLLARTLPARWPFRLALGLGRMVRPVLPATLRRRVPARQEAHEA
TQPIPSPILEGFPHGRVLLLSGCVHDAIDARTNAALKNLLGRLGVEVVEAGEARCCGAVEHHLAFEERARQRVRANLDAW
QPALDQGVDAVVSTASGCGVMLRDYGHLLAGDSDYAERARGVSERVRDPVELFSPDAIQKLGIRAPQGHDPIAWHAPCTL
QHGQRLAGRVEPLLQAAGFELAPTAEPHLCCGSAGTYSITQPAMAARLRTRKLDNLEAAAPARIITANVGCQTHLQSGTE
TPVEHWLTLLERHCPATPAGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcF CAE85243.1 GlcF protein Not tested PAI V 536 Protein 1e-95 48