Gene Information

Name : TK90_R0007 (TK90_R0007)
Accession : -
Strain : Thioalkalivibrio sp. K90mix
Genome accession: NC_013889
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 423231 - 424758 bp
Length : 1528 bp
Strand : +
Note : RNAmmer 1.2, Lagesen et al., Nucleic acids Res. Apr 22, 2007

DNA sequence :
AGAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCATGCCTAACACATGCAAGTCGAACGGTAACGCAGGAGCTTGCTC
CTGGCGACGAGTGGCGGACGGGTGAGTAACGCGTAGGAATCTGCCTGGTAGCGGAGGACAACCCGGGGAAACTCGGGCTA
ATACTGCATACGCCCTACGGGGGAAAGCGGGGGATCTTCGGACCTCGCACTATCAGATGAGCCTGCGTCCAATTAGCTTG
TTGGTGAGGTAACGGCTCACCAAGGCGACGATTGGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACG
GCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGGGGCAACCCTGATCCAGCAATGCCGCGTGTGTGA
AGAAGGCCTGCGGGTTGTAAAGCACTTTCAGTAGGGAAGAAAAGCTGTCGGCTAATACCTGGCAGTCTTGACATCACCTA
CAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGT
AAAGCGCGCGTAGGCGGTCGTGTAAGTTAGATGTGAAAGCCCCGGGCTTAACCTGGGAATTGCATCTAATACTATACGAC
TAGAGTTTGATAGAGGAGAGCGGAATTCCCGGTGTAGCGGTGAAATGCGTAGATATCGGGAGGAACACCAGTGGCGAAGG
CGGCTCTCTGGCTCAAAACTGACGCTGAGGTGCGAAAGCGTGGGTAGCAAACAGGATTAGATACCCTGGTAGTCCACGCC
CTAAACGATGAGAACTAGTTGTTGGTCGGATCTTGCCGATCAGTGACGCAGCTAACGCATTAAGTTCTCCGCCTGGGGAG
TACGGCCGCAAGGTTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAAC
GCGAAGAACCTTACCTACCCTTGACATCCTCGGAACTTGTCAGAGATGACTTGGTGCCTTCGGGAACCGAGTGACAGGTG
CTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCCCTAGTTGCCA
GCGGTTCGGCCGGGAACTCTAGGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCC
TTATGGGTAGGGCTACACACGTGCTACAATGGCCGGTACAGAGGGCTGCCAACCCGCGAGGGGGAGCCAATCCCAGAAAA
CCGGTCCTAGTCCAGATTGGAGTCTGCAACTCGACTCCATGAAGCAGGAATCGCTAGTAATCGCAGATCAGCACTGCTGC
GGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTTGACTGCACCAGAAGTGGATAGTCTAACC
TTCGGGAGGACGTTCACCACGGTGTGGTTAATGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTG
GATCACCT

Protein sequence :
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-141 89
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-141 89
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-251 87.7
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-251 87.7
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-251 87.6
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-251 87.6