Gene Information

Name : TK90_0865 (TK90_0865)
Accession : YP_003460116.1
Strain : Thioalkalivibrio sp. K90mix
Genome accession: NC_013889
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 924746 - 925039 bp
Length : 294 bp
Strand : +
Note : PFAM: microcompartments protein; SMART: microcompartments protein; KEGG: nwi:Nwi_1980 carboxysome structural peptide CsoS1B

DNA sequence : 
ATGGCTAGCGAAAACTTTGGTGTGGCCCTCGGCATGATCGAGACCCGTGGTCTGGTGCCGGCGATTGAAGCCGCTGACGC
GATGACCAAGGCCTCGGAAGTGCGCCTGATCGGTCGTCAGTTCGTCGGTGGCGGTTACGTGACCGTTCTGGTGCGTGGCG
AGACCGGCGCCGTGAACGCTGCGGTGCGTGCCGGTGCGGATTCCTGCGAGCGTGTGGGTGACGGCCTGGTGGCTGCGCAC
ATCATCGCCCGTGTGCATTCCGAGGTGGAAAACATCCTCCCGGAAAAGCCGTAA

Protein sequence : 
MASENFGVALGMIETRGLVPAIEAADAMTKASEVRLIGRQFVGGGYVTVLVRGETGAVNAAVRAGADSCERVGDGLVAAH
IIARVHSEVENILPEKP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 2e-15 53
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 2e-15 52
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 1e-14 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TK90_0865 YP_003460116.1 microcompartments protein VFG1596 Protein 8e-16 53
TK90_0865 YP_003460116.1 microcompartments protein VFG1597 Protein 7e-16 52
TK90_0865 YP_003460116.1 microcompartments protein VFG1598 Protein 6e-15 48