Gene Information

Name : DehalGT_0360 (DehalGT_0360)
Accession : YP_003462183.1
Strain : Dehalococcoides sp. GT
Genome accession: NC_013890
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : -
Position : 337956 - 338717 bp
Length : 762 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: det:DET0417 amino acid ABC transporter ATP-binding protein

DNA sequence :
ATGAACAAAAAACATACTTCTGCAGAACAACCCATTATCAAGATTGAAAACGTCCAAAAACATTTTGGGCGGGTTCAGGC
CTTGCGCGGGGTAAGCCTTGAAGTAAAAAAAGGCGAAGTAGTGGTCATTATCGGCCCTTCGGGTTCGGGTAAATCTACCC
TGTTACGCTGTATAAACCGCTTGGAAGAATATGATTCAGGCAAAATAACCGTAGACGGCATTACCCTTGACACCACCGAA
AATATCAATCATGTCCGCCGTGAGGTAGGCATGGTTTTTCAGTCCTTCAACCTGTTTTCCCACCTGAAGGTTATTGACAA
CATAACTTTAGCCCAGTGCCAGGTGAGGAAACGTACCAAAGAGGAAGCCGCGGAGAATGCGGCAGACCTGTTAAAGAAGG
TGGGCATACCGGACAAGGCTCATGCCTTTCCCCTTCAGCTATCAGGCGGCCAGCAGCAGCGGGTAGCCATAGCCAGAGCT
CTGGCCATGAATCCCCAGATAATGCTTTTTGACGAGCCGACTTCCGCCCTTGACCCTGAAATGATAAAAGAGGTTCTGGA
CGTAATGACCACTCTGGCCAAAGAGGGTATGACTATGGTAGTGGTATCTCACGAAATGGGTTTTGCCCGAGCAGCGGCTG
ACAGGGTAATTTTCATGGACGAAGGCCTGATAGTGGAAAGTGCCCCCCCGAATGAATTTTTCACTAACCCCAAACATGAA
AGAACCAAGCTCTTTCTGTCTAAAATCCTGCATAACTCCTAG

Protein sequence :
MNKKHTSAEQPIIKIENVQKHFGRVQALRGVSLEVKKGEVVVIIGPSGSGKSTLLRCINRLEEYDSGKITVDGITLDTTE
NINHVRREVGMVFQSFNLFSHLKVIDNITLAQCQVRKRTKEEAAENAADLLKKVGIPDKAHAFPLQLSGGQQQRVAIARA
LAMNPQIMLFDEPTSALDPEMIKEVLDVMTTLAKEGMTMVVVSHEMGFARAAADRVIFMDEGLIVESAPPNEFFTNPKHE
RTKLFLSKILHNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DehalGT_0360 YP_003462183.1 ABC transporter NC_012469.1.7686878. Protein 2e-28 41
DehalGT_0360 YP_003462183.1 ABC transporter NC_012469.1.7685735. Protein 5e-29 41