Name : XBJ1_1094 (XBJ1_1094) Accession : YP_003467023.1 Strain : Xenorhabdus bovienii SS-2004 Genome accession: NC_013892 Putative virulence/resistance : Virulence Product : RTX toxin secretion ATP-binding protein Function : - COG functional category : V : Defense mechanisms COG ID : COG2274 EC number : 3.6.3.43 Position : 1103967 - 1106129 bp Length : 2163 bp Strand : + Note : Evidence 6 : Doubtful CDS; PubMedId : 9927695; Product type e : enzyme DNA sequence : ATGGTTGACGCATTTTCCTTTACGAGTGATACAGACACGGAAGATCACACCAATAATCACGCACTGGATTGTGTCGCCTA TCTGGGAACACAATTTCATAAGGTTGCCTCCGTCAGACAATTGCATCATGCGCTGGGTCTGGATTCCCTGACGCTGACAG ACTGGCAGCTACGCGAAGCTATCGATGCCGTAGGCCTGCACAGCAAATTTGATCGTCTGACAGCCGATACCGCAGCCACG TTGCCTTTACCGGCACTGATTGAATTGGGTCAATGCTGGTGGGTGCTGCTCGAAGTCAGCCCAGATCAGTTTACCGTGCT CAATCCCATCACGGAAAAACAAGAAATACGCCCATTGCACGGCACACAGGCGACACCTGACGAAGCTAAACACAGTGAGT ATAAAATCCTGCTGGTGGCAGATAAATCGCTGACCAAACAGCAAGTCAAATTCGGCTTGAGCTGGTTTTATCCTTCGATT TTCAGGCAGAAAAATCAGTTGCGGGATATTTTCCTGTTCGCCATTGTGCTGCAACTTTTTGCGCTGGCATCTCCTTTGCT GTTTGAAAATGTCATCGACAAAGTACTGGTCGGACGCAGCTTATCCAGCCTGCATGTTCTTGGTCTGGCGATGCTGGCGC TGGCCGTGGCAGAACCCCTGTACGGTTTTCTGCGCAATACCGTGTTCGGACATATGGCAAGCCAGATCAACGCGGAACTC TCCGGCAGGCTTTATCGCCATCTGGTGGGATTACCCCTGCCCTATTTCAAGCAACGCCAAACCGGACAAATTATCGCGCG CGTCAGAGAAATGGCACAAATCCGCCAATTTCTGACCGGCTCCACCCTGATGTTGCTACTCGACCTGATCTTCATCATCC TGTTTCTTGGCGTCATGTTCCATTATTCCACTCTATTGACCGGGATCGTAATCAGTTCGCTGGCACTCTATTTCCTGCTT TGGATCGCTATTGGACCTCTCATCCGACGCAAAGTAGAAACCGAATATGAAGCCGATGCCCATGCCACCAGTTTCCTGAC GGAATCCGTCATGGGCATCGAAACTATCAAGACCACCGCAACAGAAAAACGCTTTCTGCGCCAGTGGCAAAAAGTGTTAA GCCAGCAATTGATCCGGCGTTTTTCCGCCCAGAAAAGTGGGCTTGCGGCCGGACAGGGGATCGCGTTGATCCAGAAAATC GTAGCGGCATTACTGCTATGGTGGGGGGTCAGAAGCGTTCTTAACGGCGAATTATCCCCCGGAGAGTTAATTGCCTTCAA TATGCTGGCAGGACACGTCACCCAGCCGATCTTACGGCTGGCGCAAGTCTGGCAGGATTTCCAGCATACTTTGATCGCTT TGCGACGGGTCGGCGATATTCTTGATGAGCCAATGGAGAGTAGCAAACAGGGGCTGGCAGCTTCCCCTGAACTTGCCGGC CAGATTGAGTTCAGGAATATTCGCTTCCGCTATCACGCAGATACGCCCGAAGTACTGGCAAATCTGTCACTGACCATCAA AGCGGGCGAATTTATTGGCATAACGGGGCCATCGGGTTCAGGTAAAAGTACCCTGACCCGGTTGTTACAGCGCCTGTATG TGCCGCAGCATGGTCAGGTTCTGGTCGATGGTATGGATTTGGCGATCGCCGATCCCGTATCACTCCGACGTAACATGAGC GTGGTATTGCAGGAAAGCATACTGTTTTCCGGCAGCATTGCGGACAATATCCGTCTGTGTAAACCCAATGCCAGCGATGA AGAAGTCTACCGGGCGGCGACTTTGGCGGGTGCAACTGACTTCATCAATGAATTTCCGCATAAATTTGCCCATTCTGTCG GGGAGAAAGGAAGCAATCTTTCCGGTGGGCAACGGCAGCGTATCGCATTGGCAAGAGCCTTGTTGAATGATCCCAAAATC CTGATTCTGGATGAAGCGACTTCCGCGCTGGATTATGAATCCGAGGCAGCCATTATGAGCAATCTGGACGAGATCCGCCA CAACCGGACGGTTATCAGCATTGCCCATCGGCTGAATACGATCCGCCATGCAGATAAAATTTTTGTTTTAGATCAAGGAA CAATCGTCGAATCTGGCTCCCATGATGACCTATTGCAACAAAACGGACTGTATGCACAACTTTGGCATCAACAAACAGAA TGA Protein sequence : MVDAFSFTSDTDTEDHTNNHALDCVAYLGTQFHKVASVRQLHHALGLDSLTLTDWQLREAIDAVGLHSKFDRLTADTAAT LPLPALIELGQCWWVLLEVSPDQFTVLNPITEKQEIRPLHGTQATPDEAKHSEYKILLVADKSLTKQQVKFGLSWFYPSI FRQKNQLRDIFLFAIVLQLFALASPLLFENVIDKVLVGRSLSSLHVLGLAMLALAVAEPLYGFLRNTVFGHMASQINAEL SGRLYRHLVGLPLPYFKQRQTGQIIARVREMAQIRQFLTGSTLMLLLDLIFIILFLGVMFHYSTLLTGIVISSLALYFLL WIAIGPLIRRKVETEYEADAHATSFLTESVMGIETIKTTATEKRFLRQWQKVLSQQLIRRFSAQKSGLAAGQGIALIQKI VAALLLWWGVRSVLNGELSPGELIAFNMLAGHVTQPILRLAQVWQDFQHTLIALRRVGDILDEPMESSKQGLAASPELAG QIEFRNIRFRYHADTPEVLANLSLTIKAGEFIGITGPSGSGKSTLTRLLQRLYVPQHGQVLVDGMDLAIADPVSLRRNMS VVLQESILFSGSIADNIRLCKPNASDEEVYRAATLAGATDFINEFPHKFAHSVGEKGSNLSGGQRQRIALARALLNDPKI LILDEATSALDYESEAAIMSNLDEIRHNRTVISIAHRLNTIRHADKIFVLDQGTIVESGSHDDLLQQNGLYAQLWHQQTE |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
hlyB | CAD42038.1 | HlyB protein | Virulence | PAI II 536 | Protein | 3e-126 | 49 |
hlyB | NP_755448.1 | hemolysin B | Virulence | PAI I CFT073 | Protein | 7e-126 | 49 |
hlyB | CAD33760.1 | hemolysin B | Virulence | PAI I 536 | Protein | 3e-126 | 49 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
XBJ1_1094 | YP_003467023.1 | RTX toxin secretion ATP-binding protein | VFG1557 | Protein | 2e-126 | 49 |
XBJ1_1094 | YP_003467023.1 | RTX toxin secretion ATP-binding protein | VFG1501 | Protein | 2e-126 | 49 |
XBJ1_1094 | YP_003467023.1 | RTX toxin secretion ATP-binding protein | VFG0907 | Protein | 3e-126 | 49 |
XBJ1_1094 | YP_003467023.1 | RTX toxin secretion ATP-binding protein | VFG0841 | Protein | 2e-120 | 47 |
XBJ1_1094 | YP_003467023.1 | RTX toxin secretion ATP-binding protein | VFG1269 | Protein | 9e-124 | 47 |