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Name : secD (XBJ1_1677) Accession : YP_003467583.1 Strain : Xenorhabdus bovienii SS-2004 Genome accession: NC_013892 Putative virulence/resistance : Unknown Product : preprotein translocase auxillary membrane protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 1636465 - 1638279 bp Length : 1815 bp Strand : - Note : - DNA sequence : ATGCTGATCGCTGCGATCCTCATCGGTTTGCTTTATGCACTTCCCAACCTATATGGTGAGGATCCGGCTGTACAAATTAC TGGCGCGCGGGGCATCGCCGCCAGTGAAAAAACGCTGGACCAAGTCCGTAATGTTTTAGAAAAAGAACAAATCAAGAGCA AGTCCATTGCACTGGAAAATGGAGCAATACTTGCTCGCTTCAATAATTCTGATGTTCAACTTCGTGCCCGTGAAGCATTG GTTTCCGCATTAGGAGAACAATATGTCGTGGCATTGAACCTTGCGCCCGCGACACCCCTTTGGCTAAGTAAAGTGGGTGC TGAGCCAATGAAACTGGGGCTTGACCTGCGTGGAGGCGTTCACTTCCTGATGGAAGTGGATATGGAAACCGCACTGAGTA AGCTACAAGAACAGAATATTGATAGCCTGCGCTCTGAATTGCGTGATCAAGGCATCCTTTATTCCTCTGTTCGTAAGCTT GATAACTATGGAGTGGAAGTCCGTTTCCGCGATAATGATGCACGTTCCAAAGCGGAAAGTTATCTTGAACCCCGTCACCG TGATTTAGTCTTCTCCACTGGCGCGAATAGTACGCTGAAAGTCGTTATGAGTGACGATCGCCTGCGTGAAGCTCGAACCT ATGCGGTACAGCAAAATATCACTATCCTGCGTAATCGTGTTAACCAGTTAGGTGTAGCAGAGCCGCTGGTTCAACGTCAG GGCGCAGACCGTATTGTCGTTGAACTGCCTGGCATTCAGGATACTGCCCGTGCCAAAGAAATCCTCGGTGCAACGGCAAC GCTGGAGTTCCGTCTGGTAAACAGTAATGTTGATCAGAGTGCCGCAGTATCTGGTCGGATTCCGGGTGATTCAGAACTGA AGTATACCCGTGATAGCAACCCGGTTGTGTTATACAAGCGCGTGATCCTGACTGGTGACCATATTACGGATTCCACTTCC AGTACTGATGAATACGGTAATCCGCAGGTGAATATTTCTCTGGACGGTGCTGGCGGTAGTGCGATGTCTAACTTCACCAA AGACAACTTGCAAAAGCCAATGGCTACGCTGTTTGTAGAATATAAGGACAGTGGCAAGAAGGATGCCAATGGCCGTTCGG TTCTGGTGAAGCAAGAAGAAGTTATTAATATCGCTACCATTCAGTCTCGTTTGGGCAATAGTTTCCGTATCACCGGAATT GGCAACCTGAATGAAGCCCGTCAGTTGGCGCTGTTGTTGCGTGCAGGTGCTTTGATCGCACCCATCCAGATTGTCGAAGA ACGGACTATTGGGCCAACCCTTGGCTTACAGAATATCAAGCAGGGGCTTGAAGCCTGTCTGTGGGGCTTGATTTCTTCTA TCCTGTTTATGGTGATCTACTACCGCAAGTTCGGATTGATTGCGAGCAGTGCTCTGCTGGCTAACTTAGTGCTGATCGTC GGTGTCATGTCCTTGTTACCGGGAGCGACGCTGACGATGCCGGGTATTGCGGGTATCGTATTGACTCTCGCCGTGGCAGT GGATGCGAACGTTTTGATTAACGAACGTATCAAAGAAGAGCTGCGTAACGGGCGTACGGTGCAGCAAGCGATTCATGAAG GCTACAAAGGTGCGTTTTCCAGTATCATTGACGCAAACCTGACTACGCTGATTACTGCTGTGATTCTGTATGCAGTGGGA ACGGGCTCCATCAAGGGCTTCGCGATCACGACCAGCATTGGTGTGGCGACGTCGATGTTCACTGCCATTGTGGGAACACG CGCAGTCGTGAACCTGCTGTACGGCGGTAAGCGTATCAATAAGCTGTCAATTTAA Protein sequence : MLIAAILIGLLYALPNLYGEDPAVQITGARGIAASEKTLDQVRNVLEKEQIKSKSIALENGAILARFNNSDVQLRAREAL VSALGEQYVVALNLAPATPLWLSKVGAEPMKLGLDLRGGVHFLMEVDMETALSKLQEQNIDSLRSELRDQGILYSSVRKL DNYGVEVRFRDNDARSKAESYLEPRHRDLVFSTGANSTLKVVMSDDRLREARTYAVQQNITILRNRVNQLGVAEPLVQRQ GADRIVVELPGIQDTARAKEILGATATLEFRLVNSNVDQSAAVSGRIPGDSELKYTRDSNPVVLYKRVILTGDHITDSTS STDEYGNPQVNISLDGAGGSAMSNFTKDNLQKPMATLFVEYKDSGKKDANGRSVLVKQEEVINIATIQSRLGNSFRITGI GNLNEARQLALLLRAGALIAPIQIVEERTIGPTLGLQNIKQGLEACLWGLISSILFMVIYYRKFGLIASSALLANLVLIV GVMSLLPGATLTMPGIAGIVLTLAVAVDANVLINERIKEELRNGRTVQQAIHEGYKGAFSSIIDANLTTLITAVILYAVG TGSIKGFAITTSIGVATSMFTAIVGTRAVVNLLYGGKRINKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 8e-115 | 48 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 5e-115 | 48 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 5e-115 | 48 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 5e-115 | 48 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 2e-115 | 48 |
