Gene Information

Name : ycfS (XBJ1_2506)
Accession : YP_003468396.1
Strain : Xenorhabdus bovienii SS-2004
Genome accession: NC_013892
Putative virulence/resistance : Unknown
Product : LysM domain-containing protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1376
EC number : -
Position : 2478162 - 2479232 bp
Length : 1071 bp
Strand : -
Note : -

DNA sequence :
ATGAAGCGATTTTTGACTTTTATCGGTATCTCTTTGATCGGTATGTTATTGTTAAGTAGTGTAGTCAATATAGCCAATGC
GATGGAGTATCCATTGCCACCAAATAACAGTCGCCTGATTGGTGAGAACGCCATCTATATTGTATCTGATGATGGGCTTT
CGCTGGAAGCCATTGCCGCCAAATACCAAATAGGTTTGCTGGCCATGCTGGAGGCTAATCCTGGCGTTGATCCTTATCTG
CCGAAACTAGGCGCTAAGCTGATTATTCCATCACAGATGCTGCTTCCCGATACTCTTCGTCAAGGTATTATCATTAATCT
GGCAGAATTTAGGCTCTATTATTTCCCCAAAGGGAAAAACTATGTTGTCGTCTATCCCATTGGGATCGGTCAGCTTGAAC
GTGATACACCGACGATGACAACGTCTGTCAGCCAATTGATTAAAAATCCAACATGGACACCAACTACCAATATTCGGAAA
GATTATGCGAGCCGAGGGATTATTTTGCCAACGGTAGTACCTGCCGGAGCGGATAATCCGATGGGGGATTTTGCCTTGCG
TTTGGCTGCTGGCCGTGGAGAATATTTGATTCATGGTACGAATGCAAATTTTGGTATTGGCATGCGTGTCAGTTCGGGCT
GTATTCGTTTGCGTCCCGATGATATTGAAAATTTGTTTTATAGCGTTCCACGAGGAACCCGTGTTCAGGTAATTAATGAA
CCAATCAAATATACAGTGGAGCCAACGGGGAAACGTTACGTGGAAATTCATCAGCCACTTTCAGATAAACAGGCCGATGA
CCCTCAGACTAGGCCGATTCAGCGCACAAAAGGGTTGATAAAATTTATTGATAATCGTGAAACAGACGCTGTTCTTGTTG
ATCAGGCGATCATTCGACGTTCAGGAATACCTGTGCGGGTAAATAAAGGTATTGCTTTATCTAATCAGGAAGAGCAAGAA
GTTTCAAGGCCGATTGAGACTCACGAAGAAGCCATTCACAGTGTTAGCCCAGTTAAATTACCGCCATTAAATCAGCCTAG
TCCCATTTATCAGACTGAACCCTTATCCTGA

Protein sequence :
MKRFLTFIGISLIGMLLLSSVVNIANAMEYPLPPNNSRLIGENAIYIVSDDGLSLEAIAAKYQIGLLAMLEANPGVDPYL
PKLGAKLIIPSQMLLPDTLRQGIIINLAEFRLYYFPKGKNYVVVYPIGIGQLERDTPTMTTSVSQLIKNPTWTPTTNIRK
DYASRGIILPTVVPAGADNPMGDFALRLAAGRGEYLIHGTNANFGIGMRVSSGCIRLRPDDIENLFYSVPRGTRVQVINE
PIKYTVEPTGKRYVEIHQPLSDKQADDPQTRPIQRTKGLIKFIDNRETDAVLVDQAIIRRSGIPVRVNKGIALSNQEEQE
VSRPIETHEEAIHSVSPVKLPPLNQPSPIYQTEPLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
erfK YP_853091.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 1e-66 52