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Name : dnaB (XBJ1_3370) Accession : YP_003469252.1 Strain : Xenorhabdus bovienii SS-2004 Genome accession: NC_013892 Putative virulence/resistance : Unknown Product : replicative DNA helicase; chromosome replication; chain elongation Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : 3.6.1.- Position : 3285722 - 3287098 bp Length : 1377 bp Strand : + Note : - DNA sequence : ATGGACATAGCGCATGAACATTTACAGATCATCAGTGAAGAGGCGCCCAGCTATGCGTATGCCGAAGTGGGGGTGTTGGG GGGGCTGGTACTGGAGAATGAGCGCTGGGATAGCGTTGTCCAGCTATTGGTTGCCGACGATTTTTATTTTCCGGCACACC GGATAATATTTCAGGCCATCGCTGAACTGAGCGAAAAAAACTGTCCGTTCGACCTGATTACCCTGACCGATAGGCTGACC CAGCGTGGGCAAATTGATCGGGCATGCGGTTTTGCTTATGTAGCGGAAGTGTGTAAAAACACGCCCAGTGCCGCCAATAT TGAGGAGTATGCCCGTATTGTGGCGGAAAAAAGCCGGTTACGTCAGTTACTGGCACTGGGAAAATCCCTCAGCGCTGACG TTTTTCAGCCGAATATTCAGTCAGATACCCTGATAGAGCAGGCAGAAAGTCAGTTGTTTAATCTGGCTGAAAAAGGTTCG ACCCGCCAGCATCAGGAAATGACCCTGTTGCAGGGCGCAGACAGCCTGATTGCCCATCTGGAGCGAATACAAGGCTCACA GGGAATAACCGGCACACCGACCGGATTTCAGGATCTTGATGAAAAAACCGGCGGCTTGCAGGCCGGTGATCTCATTTTGC TGGCTGCCCGCCCTTCGATGGGGAAAACCGCGTTGGGACTGGCCTGTTGCTTGGGTGTCCTGCGGCACCGGGATGATGCC GTGGTACAGATTTTCAGTCTGGAAATGCCGGCTGCACAACTGATGCTGCGCCTCACTGCCATGGAAGGCGGGGTTTCTCT GAGCACCCTGCGCAGCGGGATGCTGGATGATGAGCAGTGGGGACGCATAAGCCAGAGTCTGGATCAGTTTGCCCGCTGGG ATCAGCGTCTGGTTATTGATGATTGCAGTCATCAGACGCCCGCACTATTACGCGCCCGTGCCCGCCGCTATACCCGCAAA TACGGTCAACCCGCCCTGATTATGGTTGACTACCTCCAGCTGATGTGCGCGCCCGGGCAGGAAAACCGGACGCAGGAAAT TGCCGATATCTCCCGTAACCTGAAAGCGTTAGGCAAAGAACTGGGCTGCCCGGTACTGGCGCTGTCCCAGCTTAACCGGC AGGTCGAAAACCGTTCCGATAAACGTCCTAACAATGGTGACCTGCGTGATTCCGGCTCACTGGAGCAGGACGCCGACCTG ATACTGCATCTCTATCGCGATGAAGTCTATCACCCGGACACACCCGATACAGGTACTGCTGAAATCATTATTGGTAAGCA GCGTCAGGGGCCAACGGGCGTGGTTCGTGTGGGATTTGACGGCCAATATACGCGGTTTTCGGACTTATCCGCAGACAGTG ATGGTTACGGGGAGTAA Protein sequence : MDIAHEHLQIISEEAPSYAYAEVGVLGGLVLENERWDSVVQLLVADDFYFPAHRIIFQAIAELSEKNCPFDLITLTDRLT QRGQIDRACGFAYVAEVCKNTPSAANIEEYARIVAEKSRLRQLLALGKSLSADVFQPNIQSDTLIEQAESQLFNLAEKGS TRQHQEMTLLQGADSLIAHLERIQGSQGITGTPTGFQDLDEKTGGLQAGDLILLAARPSMGKTALGLACCLGVLRHRDDA VVQIFSLEMPAAQLMLRLTAMEGGVSLSTLRSGMLDDEQWGRISQSLDQFARWDQRLVIDDCSHQTPALLRARARRYTRK YGQPALIMVDYLQLMCAPGQENRTQEIADISRNLKALGKELGCPVLALSQLNRQVENRSDKRPNNGDLRDSGSLEQDADL ILHLYRDEVYHPDTPDTGTAEIIIGKQRQGPTGVVRVGFDGQYTRFSDLSADSDGYGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 2e-109 | 59 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 7e-109 | 56 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 2e-108 | 56 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 7e-109 | 55 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-103 | 53 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-103 | 53 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 6e-88 | 48 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 8e-95 | 47 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 1e-75 | 45 |
