Gene Information

Name : Thal_0119 (Thal_0119)
Accession : YP_003472883.1
Strain : Thermocrinis albus DSM 14484
Genome accession: NC_013894
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 112180 - 112860 bp
Length : 681 bp
Strand : +
Note : KEGG: hde:HDEF_0123 transporter of outer membrane lipoproteins (ABC superfamily, atp_bind); PFAM: ABC transporter; SMART: ATPase AAA

DNA sequence : 
ATGAAGGAGCCTATCTTGGAGCTGAGGGAGGTTTACAAAAGGGTAGGTGAAGAACACATTCTGAGAGGTATAAACCTCAC
CATCTATAAGGGAGAGTTTGTAGCTCTCGTGGGACCATCCGGCTCTGGAAAGAGCTCCCTCCTCTACATAATGGGTCTTC
TTGACTCACCCTCAGAGGGTGAAGTTCTCTTCCAAGGTGAGAAAGTGGACTTTCGGAAGGAAGAAAAGCTCTCCTTTCTT
AGGAACGTGAGGATAGGTTTCGTCTTTCAGTTTCACTACCTTATACCCGAGCTGAGTCTTTTGGAAAACGTCATGCTGCC
CGCCCTCAAGCGGGGTATGAAGCAACGAGAGGCTAAGGAAAAGGCCCTGTACCTTCTGGAGAAGTTGGGACTGAAAGGAA
AGGAGCACAGAAAACCTTACCAAGTTTCGGGAGGAGAACAACAACGCACCGCCATAGCCAGAGCCCTCATCAACGATCCC
TCTCTACTCTTAGCAGACGAGCCCACCGGTAACCTGGATTCTACCAACACCTCCGTAGTTATGGACATATTCCGTAGGAT
AAACGCAGAAGGTACCACAGTGGTGATGGTGACCCACGAGATGGAGTTGGTCCAAAAGGTGGGTAGAGTGGTGGAGATGA
AGGACGGTAGGTTAGTCCCCTTCCCATATGATGGATCCTAA

Protein sequence : 
MKEPILELREVYKRVGEEHILRGINLTIYKGEFVALVGPSGSGKSSLLYIMGLLDSPSEGEVLFQGEKVDFRKEEKLSFL
RNVRIGFVFQFHYLIPELSLLENVMLPALKRGMKQREAKEKALYLLEKLGLKGKEHRKPYQVSGGEQQRTAIARALINDP
SLLLADEPTGNLDSTNTSVVMDIFRRINAEGTTVVMVTHEMELVQKVGRVVEMKDGRLVPFPYDGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-22 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thal_0119 YP_003472883.1 ABC transporter CP001581.1.gene798.p Protein 9e-28 43
Thal_0119 YP_003472883.1 ABC transporter NC_008702.1.4606598. Protein 3e-24 43
Thal_0119 YP_003472883.1 ABC transporter NC_012469.1.7686878. Protein 3e-32 42
Thal_0119 YP_003472883.1 ABC transporter CP001581.1.gene598.p Protein 3e-27 41