Gene Information

Name : Aboo_0168 (Aboo_0168)
Accession : YP_003482542.1
Strain : Aciduliprofundum boonei T469
Genome accession: NC_013926
Putative virulence/resistance : Virulence
Product : glycyl-radical enzyme activating protein family
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG1180
EC number : 1.97.1.4
Position : 179150 - 180061 bp
Length : 912 bp
Strand : -
Note : SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: glycyl-radical enzyme activating protein family; KEGG: tsi:TSIB_0629 pyruvate-formate lyase-activating enzyme; PFAM: Radical SAM domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein

DNA sequence : 
ATGAGTGAAGGAGTAATCTTTGATATAAAGAGATATGCTATTCACGATGGTCCAGGAATAAGGACTACGATATTTATGAA
AGGATGCCCCTTGCGCTGCATATGGTGCCATAATCCAGAGGGCCAATCAATAAATTTTGAGATAATGTATATAGAATACA
AGTGCATCCATTGCTATACCTGTGTGCATACTTGTCCTTACAAGCTGATTTACTTTGATGATTTTGGTGCGCAGCATATT
GAGAGGGATAAATGCACCTATTGCGGTATATGCACAGAAAATTGTCCCACAAGTGCTTTGGAATTCATTGGTAGGAAAAT
AACGGTGGAGGAATTAATGAAAGAAATAGAAAAAGATATAACACTTTACGATTCCTCAGGAGGGGGTGTAACTTTCTCTG
GAGGAGAGCCCCTTATGCAGCCAGAGTTTTTGAAGGAAGCTCTAATAGAATGCAAAAAAATAGGAGTTCATACCACTTTA
GATACATCTGGTTACGCTTCCCGAGAAGTATTGGAATCTATTATGGATTATGCGGATTTATTTCTTTATGATATTAAGCT
CTATGATTCTAAGGAGCATAAGAAGTATACTGGGGTGTCCAATGAAATAATAAAAGAGAACCTGAAGTTCCTTGTTAAAT
TAGGGAGAGGAGAAGATATAATATTGCGTTTTCCTGTGATTCCCACGATAACAGATACTGAAGAGAATGTGGAAGGATGG
AAGAAATTTATAAAGGAATTAGGAGGTATAAAAGAGATAAATCTGCTGCCCTATCATGATGTGAGTGAGAAATTTAGAAG
ATTGGGAAGAGAGTACATGATGCAGGTGCACGAGTCACCAAGCGAAGAGAAGATGAAAGAGATAAAAGAAAAATTTGAAG
AGATAGGATTGTATGTCAAAATTGGTGGATAA

Protein sequence : 
MSEGVIFDIKRYAIHDGPGIRTTIFMKGCPLRCIWCHNPEGQSINFEIMYIEYKCIHCYTCVHTCPYKLIYFDDFGAQHI
ERDKCTYCGICTENCPTSALEFIGRKITVEELMKEIEKDITLYDSSGGGVTFSGGEPLMQPEFLKEALIECKKIGVHTTL
DTSGYASREVLESIMDYADLFLYDIKLYDSKEHKKYTGVSNEIIKENLKFLVKLGRGEDIILRFPVIPTITDTEENVEGW
KKFIKELGGIKEINLLPYHDVSEKFRRLGREYMMQVHESPSEEKMKEIKEKFEEIGLYVKIGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42072.1 hypothetical protein Not tested PAI II 536 Protein 8e-44 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Aboo_0168 YP_003482542.1 glycyl-radical enzyme activating protein family VFG1591 Protein 4e-44 41