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Name : secD (G2583_0517) Accession : YP_003498130.1 Strain : Escherichia coli CB9615 Genome accession: NC_013941 Putative virulence/resistance : Unknown Product : protein-export membrane protein secD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 530960 - 532807 bp Length : 1848 bp Strand : + Note : - DNA sequence : GTGTTAAACCGTTATCCTTTGTGGAAGTACGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAA CCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGAGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCC AGAAAACGTTACAAGAAGAAAAAATAACTGCTAAGTCTGTGGCACTGGAAGAGGGCGCTATTCTTGCGCGCTTCGACTCC ACTGACACCCAGCTGCGCGCTCGTGAAGCATTAATGGGCGTTATGGGTGACAAATACGTCGTGGCGCTTAACCTTGCCCC GGCAACGCCGCGCTGGCTGGCAGCTATTCACGCTGAGCCGATGAAGCTCGGCCTTGACCTGCGTGGCGGCGTTCACTTCC TGATGGAAGTGGATATGGACACCGCGCTTGGCAAACTCCAGGAACAAAATATCGATAGCCTGCGCAGCGACCTGCGCGAA AAAGGCATCCCGTATACCACCGTTCGTAAAGAAAATAACTACGGCCTGAGCATCACTTTCCGCGATGCTAAAGCTCGTGA TGAAGCCATTGCGTATCTGAGCAAGCGTCATCCGGACCTGGTGATTAGCAGTCAGGGCAGCAACCAGCTGCGTGCGGTAA TGAGCGATGCTCGTCTGAGTGAAGCGCGTGAATATGCGGTGCAGCAGAACATCAATATCCTGCGTAACCGTGTAAACCAA CTTGGCGTGGCGGAGCCGGTGGTTCAGCGTCAGGGTGCTGACCGTATCGTTGTTGAACTGCCAGGTATTCAGGACACTGC GCGTGCGAAAGAGATTCTGGGTGCGACGGCAACGCTGGAATTCCGTCTGGTAAACACCAACGTTGATCAGGCCGCTGCGG CATCCGGTCGCGTACCGGGCGACTCTGAAGTGAAACAGACCCGCGAAGGTCAGCCGGTTGTGCTGTACAAACGCGTAATT CTTACCGGTGACCATATCACCGACTCCACTTCCAGCCAGGACGAATACAACCAGCCGCAGGTTAACATCTCGCTCGATAG CGCTGGTGGCAACATTATGTCTAACTTCACCAAGGACAACATCGGCAAACCGATGGCAACCCTGTTTGTGGAGTACAAAG ACAGCGGTAAGAAAGATGCAAATGGTCGTGCGGTTCTGGTGAAACAGGAAGAGGTGATTAACATCGCCAACATCCAGTCT CGTCTGGGTAACAGCTTCCGTATCACCGGCATCAACAACCCGAACGAAGCCCGTCAGCTGTCACTGCTGCTGCGTGCCGG TGCGTTGATCGCGCCGATTCAGATTGTTGAAGAACGTACAATTGGCCCGACCCTGGGTATGCAGAACATTGAGCAGGGGC TGGAGGCTTGCCTTGCCGGTCTGCTGGTTTCTATTCTGTTCATGATCATCTTCTATAAGAAGTTTGGTCTGATTGCGACC AGTGCTCTGATTGCCAACTTGATCTTGATCGTCGGTATTATGTCGCTGTTGCCAGGCGCAACACTGAGTATGCCAGGTAT CGCGGGTATCGTCTTAACCCTTGCGGTAGCGGTCGATGCGAACGTACTGATCAACGAACGTATTAAAGAAGAGTTGAGCA ACGGACGTACTGTTCAACAGGCAATTGATGAAGGTTATCGTGGCGCATTCAGTTCTATCTTCGATGCGAACATCACCACG CTGATTAAAGTCATCATCCTGTACGCAGTGGGTACCGGGGCAATTAAAGGGTTCGCGATTACTACCGGTATCGGTGTGGC GACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATCGTAAACCTGCTATATGGCGGCAAGCGCGTCAAGAAGCTGT CAATCTGA Protein sequence : MLNRYPLWKYVMLIVVIVIGLLYALPNLFGEDPAVQITGARGVAASEQTLIQVQKTLQEEKITAKSVALEEGAILARFDS TDTQLRAREALMGVMGDKYVVALNLAPATPRWLAAIHAEPMKLGLDLRGGVHFLMEVDMDTALGKLQEQNIDSLRSDLRE KGIPYTTVRKENNYGLSITFRDAKARDEAIAYLSKRHPDLVISSQGSNQLRAVMSDARLSEAREYAVQQNINILRNRVNQ LGVAEPVVQRQGADRIVVELPGIQDTARAKEILGATATLEFRLVNTNVDQAAAASGRVPGDSEVKQTREGQPVVLYKRVI LTGDHITDSTSSQDEYNQPQVNISLDSAGGNIMSNFTKDNIGKPMATLFVEYKDSGKKDANGRAVLVKQEEVINIANIQS RLGNSFRITGINNPNEARQLSLLLRAGALIAPIQIVEERTIGPTLGMQNIEQGLEACLAGLLVSILFMIIFYKKFGLIAT SALIANLILIVGIMSLLPGATLSMPGIAGIVLTLAVAVDANVLINERIKEELSNGRTVQQAIDEGYRGAFSSIFDANITT LIKVIILYAVGTGAIKGFAITTGIGVATSMFTAIVGTRAIVNLLYGGKRVKKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 2e-122 | 49 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 2e-122 | 49 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 2e-122 | 49 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 8e-123 | 49 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 4e-122 | 48 |
