|
Name : Mrub_2754 (Mrub_2754) Accession : YP_003508522.1 Strain : Meiothermus ruber DSM 1279 Genome accession: NC_013946 Putative virulence/resistance : Unknown Product : FAD linked oxidase domain-containing protein Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : - Position : 2794472 - 2795911 bp Length : 1440 bp Strand : + Note : PFAM: FAD linked oxidase domain protein; SPTR: A0NUZ3 ATPase, E1-E2 type; InterPro IPR004113:IPR006094; COGs: COG0277 FAD/FMN-containing dehydrogenase; KEGG: pst:PSPTO_3555 glycolate oxidase subunit GlcD; PFAM: FAD binding domain; FAD linked oxidases, C-t DNA sequence : ATGATTCCTCTAGACGAGTTGGCCAGACTCTTTCCCCCTACGCGCCTGCTGCACAAACCCGGCGAGTTGGCGCCATACGA ATCCGATGCGCTCACGGCCTTCCGGGCCCGACCGCTGGCGGTAGTGCTACCCGAAACCCATGAAGAGGTGGTGGCCGCGG TGCGCTGGTGTGCCAAGCATCAGGTGCCCTATGTGGCCCGCGGCTCCGGCACCAGCCTTTCGGGGGGCTCGCTGCCCATT GAGGGGGGCCTGGTCATTGGGCTCAACCGCATGAACAAACTCCTGCGGCTCGAGCCCCAGGAGCGCATTGCCGTGGTGCA GCCCGGCTTTATCAACTTACAGGTCTCGAATGCCGCCGCCCCCTATGGCCTCTACTACGCCCCTGACCCCTCTTCCCAGC CGGTCTCGACCATTGGGGGGAACCTGGCCTTTAACTCGGGCGGGGCCCACTGCCTCAAGTACGGCATGACCTCCAACCAC GTGCTGGCGGCCAGGGTGGTACTGCCCGACGGCGAGAGCGTGGTGCTGGGCAGCGAGAGCCTAGAGAATGCCGGCCCCGA CTGGCTGGGCCTGTTCGTGGGCAGCGAGGGGCTGCTGGGCATCGCCACCGAGATCACCCTGCGCCTTTTGCCCAAACCCG AGGCCTATCACACCGTGCTGGCCGCCTACGACACGCTGGAGAAAGCCGGTGACGCGGTGGCCGCGGTGGTGGCTTCTGGC CTTTTGCCCGGCGCGATGGAGATCATGGACTCGCTGGCGATTGAAGCCGCCGAGGCCGCGGTCAAGGCTGGTTATCCAAG GGAGGCCCGGGCCCTGTTGATTGTGGAGCTCGAGGGCGAACCCCCCCAGGTGGAGGCCGAGGCCCGCTATCTGGACGAGG TCATCCGGCAATCGGGGGCCTACGAGGTGCAGGTGGCCCAGAGCGCCGAGGAGCGCCTGAAAATCTGGAAAGGGCGCAAG GCCGCCTTCTCGGCAGTGGGGCGGCTCTCGCCCGACTACCTTGTGCAAGACGGGGTGGTGCCCCGCTCTAAGCTGGGCCA GGCCTTAGCCGAGATCGAGCGGCTCTCCGCACGCTATGGCCTGCGGGTGGCCAATGTTTTCCATGCAGGCGATGGCAACC TGCACCCCCTGATTCTCTACAACGGGCGGGAGGCCGGGGAGCTCGAGCGGGCCGAGGCGCTGGCGGGGGAGATCCTGCGC CTGTGCGTGGCCCTGGGCGGCTCCATCACCGGCGAGCACGGGGTGGGTATGGAGAAAAAAGCCTACATGCCCGAGATGTT CTCCGAGGCCGACCTGGCCGCCATGCGGCGCATCCGCCTGGCCCTGGATCCCCTCGAGCTTTCCAACCGTGGCAAGATGT TCCCCGGCGGCGAAGCCCCTGCGCTGCACCAGGCCGGGCCCCATCCCCTGGAGCGGGCCGGGGTTATTTCCAGGGAGTAG Protein sequence : MIPLDELARLFPPTRLLHKPGELAPYESDALTAFRARPLAVVLPETHEEVVAAVRWCAKHQVPYVARGSGTSLSGGSLPI EGGLVIGLNRMNKLLRLEPQERIAVVQPGFINLQVSNAAAPYGLYYAPDPSSQPVSTIGGNLAFNSGGAHCLKYGMTSNH VLAARVVLPDGESVVLGSESLENAGPDWLGLFVGSEGLLGIATEITLRLLPKPEAYHTVLAAYDTLEKAGDAVAAVVASG LLPGAMEIMDSLAIEAAEAAVKAGYPREARALLIVELEGEPPQVEAEARYLDEVIRQSGAYEVQVAQSAEERLKIWKGRK AAFSAVGRLSPDYLVQDGVVPRSKLGQALAEIERLSARYGLRVANVFHAGDGNLHPLILYNGREAGELERAEALAGEILR LCVALGGSITGEHGVGMEKKAYMPEMFSEADLAAMRRIRLALDPLELSNRGKMFPGGEAPALHQAGPHPLERAGVISRE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 4e-90 | 50 |
