Gene Information

Name : Snas_5003 (Snas_5003)
Accession : YP_003513733.1
Strain : Stackebrandtia nassauensis DSM 44728
Genome accession: NC_013947
Putative virulence/resistance : Unknown
Product : D-lactate dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0277
EC number : 1.1.2.4
Position : 5309824 - 5311275 bp
Length : 1452 bp
Strand : -
Note : PFAM: FAD linked oxidase domain protein; KEGG: afw:Anae109_2921 D-lactate dehydrogenase (cytochrome)

DNA sequence :
ATGGACGTGACGGGGCTGGCTCCGGCGTTTCGTGAGATCGTCGGCGCGGACGCCGTCATCACCGATCACCAGGAGCTGCG
CACCTACGAGTGCGACGGCCTGACCTCGCACGCGGCCGTGCCGGGCATCGTGGTGCTGCCGACCAGCGCCGACCAGGTCG
CCCGGATCGTGAGGACCTGTGTCGCCGAAGGGGTCCCGTACGTCGCGCGCGGTTCGGGCACCGGCCTGTCGGGCGGGGCG
CTGCCGCGCGCCGACGGGGTTCTCATCGTCACCTCCCGGATGCGGCGCGTTCTCGGCGTCGACGTCGCCAACCGGATCGC
CGTCGTCGAACCCGGGGTGGTGAACCTCGCGGTGACGCGGGCGGCCTCCCCGTCCGGGTACTACTACGCTCCCGACCCGT
CCAGCCAGCAGATCTGCTCGATCGGCGGCAACGTCGCCGAGAACTCCGGCGGCGCGCACTGCCTGAAGTACGGGTTCACC
GTCAACCACGTCCTGGGCCTGGAGATCGTGACCCCGCAGGGGGAGTTGGTGCGGCTCGGTGGGCCCGCGGTGCAGTACCC
CGGCTATGACCTGGTGGGCGCGTTCGTGGGTTCGGAGGGCACGCTCGGCATCGCCACCGAGGTGACGGTGCGGCTGTTGC
GGGCGCCCGAGGACGTGGCGACCCTGTTGGCGGCCTTCGACTCCATCGACGCCGCCGGGGCCTGCGTGTCGGCGATCATC
GCGGCGGGCATCATCCCGGCCGCGATCGAGATGATGGACGCGACCGCGATCGCCGCCGTCGAGGCGGCGGTGGCCTGCGG
TTACCCGCCCGGGGCCGCCGCGGTGCTGATCGTCGAGGTGGACGGACCGGCCGCCGAGGTCGCCGCGCAGCTGGACCAGG
TGCGCACCCTCGCCGCCGAGGCCTTCGACATCCGCGTCGCCGCCGACGACACCGAACGGGCCGCGATCTGGAAGGGCCGC
AAGTCCGCGTTCGCGGCCATCGGGCACACCTCGCCCTCGTACATCGTCCAGGATGGAGTCGTGCCGCGCACCGCGCTGCC
CGCCGTGCTGAGCCGGATCGAGACGCTGTCGCGCGACAGCGGTATCGCCGTGGCCAACGTCTTCCACGCCGGGGACGGCA
ACCTGCATCCGCTGGTCATGTACGACGACAAGGTCGCCGGTGAGACCGAACGCGCCGAGGAGGTGTCGGCCGCGATCCTG
GACCTGTGCCTGTCGCACGGCGGATCACTGACTGGCGAACACGGGATCGGGGTAGACAAATCCCGGTATATGCCGCGGAT
GTTCTCCGACGCGGACCTGGACACGATGCAACTGCTGCGCTGCGCCTTCGACCCGGGCGGCTTGTGCAACCCGGGGAAGG
TGTTCCCGACGCCGCGCTTGTGCGGCGAACGGCCAGGTCACCGCAAGGGCGTGCATCCGCTTGCCGAATCCGGGAAGGCG
GAATTGCTGTGA

Protein sequence :
MDVTGLAPAFREIVGADAVITDHQELRTYECDGLTSHAAVPGIVVLPTSADQVARIVRTCVAEGVPYVARGSGTGLSGGA
LPRADGVLIVTSRMRRVLGVDVANRIAVVEPGVVNLAVTRAASPSGYYYAPDPSSQQICSIGGNVAENSGGAHCLKYGFT
VNHVLGLEIVTPQGELVRLGGPAVQYPGYDLVGAFVGSEGTLGIATEVTVRLLRAPEDVATLLAAFDSIDAAGACVSAII
AAGIIPAAIEMMDATAIAAVEAAVACGYPPGAAAVLIVEVDGPAAEVAAQLDQVRTLAAEAFDIRVAADDTERAAIWKGR
KSAFAAIGHTSPSYIVQDGVVPRTALPAVLSRIETLSRDSGIAVANVFHAGDGNLHPLVMYDDKVAGETERAEEVSAAIL
DLCLSHGGSLTGEHGIGVDKSRYMPRMFSDADLDTMQLLRCAFDPGGLCNPGKVFPTPRLCGERPGHRKGVHPLAESGKA
ELL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcD CAE85245.1 GlcD protein Not tested PAI V 536 Protein 1e-94 49